Gene Snas_5190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5190 
Symbol 
ID8886398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5512578 
End bp5512913 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content71% 
IMG OID 
Producttranscription factor WhiB 
Protein accessionYP_003513918 
Protein GI291302640 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.188253 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.499473 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCACA CGAAGAAGGC ACCGAAGCCC GAGGAAATCG AGGCCGCACG ACACGACCCC 
CGGCTGCGAC GCGCGCACGA GACCCGCCGC AGTGACCCGG AATGGCGAAT GCGGGGACGT
TGCGTCGCCG TCGACCCCGA GACCTTCTTT CCCGACCCGC AGGTGAAACA GTCCCCGCGC
GCGGCGCTGG CGGTGTGCTC GGCCTGCGCC GTCCAGTCGA CCTGCCTGGC CTGGGCACTG
GACGCGGGCG ACTGCAACGG CGTCTGGGGC GGCACCACTC CGGGTGAGCG CAAGGCGATG
GTGGTGGCGT GGCGGGACTT CGTCCCGGTC GGCTGA
 
Protein sequence
MSHTKKAPKP EEIEAARHDP RLRRAHETRR SDPEWRMRGR CVAVDPETFF PDPQVKQSPR 
AALAVCSACA VQSTCLAWAL DAGDCNGVWG GTTPGERKAM VVAWRDFVPV G