Gene Snas_5188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5188 
Symbol 
ID8886396 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5511206 
End bp5511469 
Gene Length264 bp 
Protein Length87 aa 
Translation table11 
GC content65% 
IMG OID 
Productanti-sigma factor 
Protein accessionYP_003513916 
Protein GI291302638 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.167688 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.517695 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCTGTG GTGATCCGCA CGAGGTGGAC TGTCGGGAAG TGCTCTCGGA GGTTTACTTC 
TATCTCGACT CCGAATGCGG CGACGCCCGC CGCGACCTGA TCAAGCAGCA TCTGGCGGAG
TGCTCGCCCT GCCTGGCCGA ATACGGGATC GAACAGGACG TCCGGGCCCT GGTACACCGC
TGCTGCTCCA AGGACACCGC GCCCCAGGAA GTCAAGGCGC GCCTGCGCGA GAAGCTCGCC
AAGTTCGACC TCGGCAGCGG CTGA
 
Protein sequence
MSCGDPHEVD CREVLSEVYF YLDSECGDAR RDLIKQHLAE CSPCLAEYGI EQDVRALVHR 
CCSKDTAPQE VKARLREKLA KFDLGSG