| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_5176 |
|---|
| Symbol | |
|---|
| ID | 8886384 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | - |
|---|
| Start bp | 5499343 |
|---|
| End bp | 5500098 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003513904 |
|---|
| Protein GI | 291302626 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.132232 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCCTT CGATATCCGA CTGGCAGGAA GCCGAAGCCC TGGCCAGCCT CCACATGCGG
CAACTGGGAT TGTCCCGTCC ACACCTCACC CCACCGGGCG CCGACGGCGG AGTCGACGTG
CTGGCGGACG AAGCCGCAGC CCAAGTCAAG TTTGAGAAGA GCACAACCGG AAAGCCTGCG
GTGCAACGCT TGTACGGCGA AGTCAAGCGG CGCGGCATCC ATGGCATCTT CTACAGCCTG
AGCGGGTTCT CCGCGCCCGC TATCACCTTC GCGAACGAGA CGGGAATCGC GCTATTCAAG
TTTAATGTGG ATGGTCTGGT GGCTCCCGTG AACGGCCACG CCGGTCATAT GGCGGCGCAG
GTGCGACGAA TGGCGCCAGA GGCGAGGACA GCGTCGCGCA GTCCATGGTG GCTCGCTCCC
GTGGCAAAGG GACGCTGGTA TTTCTATCTG CCGATCCTCA CCTGGGGGTT CCTGGCATTT
GTGCCGTTCA TCCACGCGAG TGTCAAGTCG CGCAACCGCC GAATGGGATG GCTGGCCTGC
TTGTTCGGCG CCATGACCTT CGGATCCTGT GTGTCACTTT CGATCATTTC ACCGCCGGCC
GACACTGGCC CTCCACCGGA ACCGGCGATG TCGATACTGA TGTTCTCGCT GCTGCTTGGC
GGCATCATCG CGACCGTGCT CCTCATCCGG ATCAGGCGCG AGGTCTACCA CCTGGACGGC
CGGGTGCCGG AGACCCGAAG AGTCACTCTC GGGTGA
|
|---|
| Protein sequence | MPPSISDWQE AEALASLHMR QLGLSRPHLT PPGADGGVDV LADEAAAQVK FEKSTTGKPA
VQRLYGEVKR RGIHGIFYSL SGFSAPAITF ANETGIALFK FNVDGLVAPV NGHAGHMAAQ
VRRMAPEART ASRSPWWLAP VAKGRWYFYL PILTWGFLAF VPFIHASVKS RNRRMGWLAC
LFGAMTFGSC VSLSIISPPA DTGPPPEPAM SILMFSLLLG GIIATVLLIR IRREVYHLDG
RVPETRRVTL G
|
|---|
| |