Gene Snas_5161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5161 
Symbol 
ID8886369 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5485300 
End bp5485566 
Gene Length267 bp 
Protein Length88 aa 
Translation table11 
GC content63% 
IMG OID 
Producttranscription factor WhiB 
Protein accessionYP_003513889 
Protein GI291302611 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTGGC GCCACATCGC CATCTGCCGG GACGAGGACC CGGAGCTGTT CTTCCCCATT 
GGAGACAGTG GTCCCGCCTT GGTGCAGATC GAGCAGGCCA AGGGAGTCTG CCGGCGCTGC
CCCGTAACCG AAGAGTGCCT GAAATGGGCA CTTGAATCCG GACAGGACGC CGGAATTTGG
GGCGGAATGA GCGAAGACGA ACGGCGCGCT CTCAAACGCC GTGGCGGAAT ACGGACTTTG
TCCGTCGCCG CTCGCACGGC CGCTTAA
 
Protein sequence
MDWRHIAICR DEDPELFFPI GDSGPALVQI EQAKGVCRRC PVTEECLKWA LESGQDAGIW 
GGMSEDERRA LKRRGGIRTL SVAARTAA