Gene Snas_5158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5158 
Symbol 
ID8886366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5482901 
End bp5484061 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content70% 
IMG OID 
ProductMalate dehydrogenase (oxaloacetate- decarboxylating) 
Protein accessionYP_003513886 
Protein GI291302608 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.833951 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACA ACAGCCAGAT CATGCGTGAC CACGAGGGCG GCAAGCTCCG GATGGAGCCC 
ACCCGGCCGC TGCGGACCCG TGAGGATCTG TCCATTGCCT ACACTCCCGG GGTCGCGGAG
GTGTGCCGCG CGATCCACGC CGAGCCCGCC CTGGCCAAGA AGTACACCTG GACGTCCCGG
CTTGTCGCCG TGGTCTCGGA CGGCACCTCG GTGCTGGGGC TGGGCGACAT CGGACCGGCC
GCCGCGATGC CGGTGATGGA GGGCAAGGCC GTCCTGTTCC GGAAGTTCGC CAATGTGGAC
GCGATCCCGA TCTGCCTGGA CACCACCGAT CCCGAGGAGA TCATCGCCAC GGTCAAGAAC
CTGGCGCCGT CCTTCGGTGG CATCAACCTG GAGGACATCT CCGCCCCCCG CTGCTTCGAG
ATCGAGGCGC GGCTGGAGGC CGAGCTCGAC ATCCCGGTCA TGCACGACGA CCAGCACGGC
ACCGCCGTGG TGGTGCTGGC GGCGCTGCGC AACGCCATGC GGCTGACCGA CACCAAACTC
GCCGACTCCC GGGTCGTGGT GATGGGCGCG GGCGCCGCGG GCGTCGCGGT GTCCAAGATG
CTGATCTCGG CGGGCATCGG CGAGGTCACG GTCTGCGACT CGCGGGGCAT CATCCACTCC
GGACGCGACG GTCTGAACCC GGCCAAGGAG GAACTGGCCG AGATCACCAA CGCCAGCGGC
CTGCGCGGCG ACGTCGAGCA CGCGCTGCGC GGCGCCAACG TCCTGGTGGG CCTGTCGGGC
GCCCGGCTGA CCGAGTCCCA GATCGCCACG ATGGCCTCCG ACGCGATCAT CTTCGCGCTG
TCCAACCCGG ACCCGGAGGT GTCGCCGACG ATCGCGTCGA AGTACGCCTC GGTGGTGGCG
ACCGGCCGCA GCGACATGCC GAACCAGATC AACAACGTGC TGGCCTTCCC GGGCATCTTC
GCCGGGGCCT TCGACGCCGG GGCGCGCAAC ATCACCCCGT CGATGAAGCT GGCCGCCTCC
GAGGCGATCG CCGACTGCAT CGGCGACGAG CTGGGCCCCG AGTACATCGT CCCGTCCCCG
CTGGACCCGC GGGTCGCCCC CGCCGTGTCG GTGGCGGTCG CGGCGGCGGC GCGGGCCGAC
GCGGAATCCG GTGCCTCTTA G
 
Protein sequence
MTDNSQIMRD HEGGKLRMEP TRPLRTREDL SIAYTPGVAE VCRAIHAEPA LAKKYTWTSR 
LVAVVSDGTS VLGLGDIGPA AAMPVMEGKA VLFRKFANVD AIPICLDTTD PEEIIATVKN
LAPSFGGINL EDISAPRCFE IEARLEAELD IPVMHDDQHG TAVVVLAALR NAMRLTDTKL
ADSRVVVMGA GAAGVAVSKM LISAGIGEVT VCDSRGIIHS GRDGLNPAKE ELAEITNASG
LRGDVEHALR GANVLVGLSG ARLTESQIAT MASDAIIFAL SNPDPEVSPT IASKYASVVA
TGRSDMPNQI NNVLAFPGIF AGAFDAGARN ITPSMKLAAS EAIADCIGDE LGPEYIVPSP
LDPRVAPAVS VAVAAAARAD AESGAS