Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_5158 |
Symbol | |
ID | 8886366 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 5482901 |
End bp | 5484061 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | Malate dehydrogenase (oxaloacetate- decarboxylating) |
Protein accession | YP_003513886 |
Protein GI | 291302608 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.833951 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGACA ACAGCCAGAT CATGCGTGAC CACGAGGGCG GCAAGCTCCG GATGGAGCCC ACCCGGCCGC TGCGGACCCG TGAGGATCTG TCCATTGCCT ACACTCCCGG GGTCGCGGAG GTGTGCCGCG CGATCCACGC CGAGCCCGCC CTGGCCAAGA AGTACACCTG GACGTCCCGG CTTGTCGCCG TGGTCTCGGA CGGCACCTCG GTGCTGGGGC TGGGCGACAT CGGACCGGCC GCCGCGATGC CGGTGATGGA GGGCAAGGCC GTCCTGTTCC GGAAGTTCGC CAATGTGGAC GCGATCCCGA TCTGCCTGGA CACCACCGAT CCCGAGGAGA TCATCGCCAC GGTCAAGAAC CTGGCGCCGT CCTTCGGTGG CATCAACCTG GAGGACATCT CCGCCCCCCG CTGCTTCGAG ATCGAGGCGC GGCTGGAGGC CGAGCTCGAC ATCCCGGTCA TGCACGACGA CCAGCACGGC ACCGCCGTGG TGGTGCTGGC GGCGCTGCGC AACGCCATGC GGCTGACCGA CACCAAACTC GCCGACTCCC GGGTCGTGGT GATGGGCGCG GGCGCCGCGG GCGTCGCGGT GTCCAAGATG CTGATCTCGG CGGGCATCGG CGAGGTCACG GTCTGCGACT CGCGGGGCAT CATCCACTCC GGACGCGACG GTCTGAACCC GGCCAAGGAG GAACTGGCCG AGATCACCAA CGCCAGCGGC CTGCGCGGCG ACGTCGAGCA CGCGCTGCGC GGCGCCAACG TCCTGGTGGG CCTGTCGGGC GCCCGGCTGA CCGAGTCCCA GATCGCCACG ATGGCCTCCG ACGCGATCAT CTTCGCGCTG TCCAACCCGG ACCCGGAGGT GTCGCCGACG ATCGCGTCGA AGTACGCCTC GGTGGTGGCG ACCGGCCGCA GCGACATGCC GAACCAGATC AACAACGTGC TGGCCTTCCC GGGCATCTTC GCCGGGGCCT TCGACGCCGG GGCGCGCAAC ATCACCCCGT CGATGAAGCT GGCCGCCTCC GAGGCGATCG CCGACTGCAT CGGCGACGAG CTGGGCCCCG AGTACATCGT CCCGTCCCCG CTGGACCCGC GGGTCGCCCC CGCCGTGTCG GTGGCGGTCG CGGCGGCGGC GCGGGCCGAC GCGGAATCCG GTGCCTCTTA G
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Protein sequence | MTDNSQIMRD HEGGKLRMEP TRPLRTREDL SIAYTPGVAE VCRAIHAEPA LAKKYTWTSR LVAVVSDGTS VLGLGDIGPA AAMPVMEGKA VLFRKFANVD AIPICLDTTD PEEIIATVKN LAPSFGGINL EDISAPRCFE IEARLEAELD IPVMHDDQHG TAVVVLAALR NAMRLTDTKL ADSRVVVMGA GAAGVAVSKM LISAGIGEVT VCDSRGIIHS GRDGLNPAKE ELAEITNASG LRGDVEHALR GANVLVGLSG ARLTESQIAT MASDAIIFAL SNPDPEVSPT IASKYASVVA TGRSDMPNQI NNVLAFPGIF AGAFDAGARN ITPSMKLAAS EAIADCIGDE LGPEYIVPSP LDPRVAPAVS VAVAAAARAD AESGAS
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