Gene Snas_5152 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5152 
Symbol 
ID8886360 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5478231 
End bp5478737 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content69% 
IMG OID 
Producttranscriptional regulator, LuxR family 
Protein accessionYP_003513880 
Protein GI291302602 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.448203 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGAACT TCGACGACTA CGTACGGGCG CGCGGCGACG CCCTCATGAG ATTCGCCTAT 
CTGCTGTGCG GTGACAGGCA CCGAGCCGAG GACTTCGTCC AGGAGGCTCT GATCCGCTGC
CACCGCCGAT GGCGCGCCAT CGAACGCGAC GGCGATCCCG AACCCTACGT CCGCAAGGCC
GTGCTGCGGC AGTTCCTGTC CTGGCGCCGC CGCAAGGTCG CCAGCGAACA CGTCGCCGAC
GAGATGGCCA AGACCGCGTC CGGAACCGAC ACGGCACAGG CCATCGCCGA ACGCGACGCG
ATGTGGCGCG TGCTGGCCAC GCTGCCGCGA CGGCAGCGCG CCGTACTGGT GCTGCGCTAC
TACGAGGACC TGCCCGACGC GCAGGTCGCC GAACTGCTGG GCTGTTCGGC CGCGACGGTA
CGGGTGCACG TCAGCCGGGC GCTGGCGAAA CTGCGGGAGC ACCCCGGGCT GCCGAACTTC
ACCATCAAGA CCGAGGAGCG GGTATGA
 
Protein sequence
MENFDDYVRA RGDALMRFAY LLCGDRHRAE DFVQEALIRC HRRWRAIERD GDPEPYVRKA 
VLRQFLSWRR RKVASEHVAD EMAKTASGTD TAQAIAERDA MWRVLATLPR RQRAVLVLRY
YEDLPDAQVA ELLGCSAATV RVHVSRALAK LREHPGLPNF TIKTEERV