Gene Snas_5150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5150 
Symbol 
ID8886358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5476459 
End bp5477568 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content67% 
IMG OID 
Productbeta-lactamase 
Protein accessionYP_003513878 
Protein GI291302600 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.175198 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.654906 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACAC GAACCCGGCT GTCTCGGCGC GGACTCGTGG CCACCACGGT GGGAGCCGCC 
TCGGCTCTCG CCGTGGGTGG CGGCGCCTGG GCGTGGGCCA CGTCCGGACA CGAGACCATC
GACGAGTACC TGCGCGACAA CCTCCCCGAC GACGCCAGCC TCGCGATCGT CGCCGTCCGG
GGTGGGAAAA CCCTGTACCG CAAGGGTTTC GGACTCGCCG ATCGCAAGGC CGACATCCGC
TGCGGCCACC GGACCGTCTT CGACATCGGC TCGGTGACGA AGCAGTTCAC CGGCGCGGCG
ATCCTGCGGC TCGACATGGA CGGTGCGCTG AAGGTCTCCG ATCCGCTGTC GCGGCACCTT
CCCGGACTGC CCGCCGACAA GCGAAAGATC ACGCTGCACC AACTGCTCAC CCACACCGGC
GGCTTCACCG ACCTCCCCGA CCTCAGCGAC TACGACGAGG TCGACCGTTC CCGACTGCTG
AGCGAATTCG GCGATCGGGA ACTGAAGTGG AAACCCGGCA CCCGTTACGA ATACTCCAAC
CTCGGCTACA GCGTGCTGGC CGCCGTCATC GAGATCGTGA CCTCCGGAAA CTACGAGGAA
TACCTCGCCG ACAACCTGTT CCACCCCGCC GGGATGCGTC ACACCGGGTA CCTGTTGCCC
GACTGGGATC CCGCGACCGT CGCGCAGCAG TACGACGACA AGGGCCGCGT GATGGGCAAA
CCCCACGAAC TCCCGTGGGA CGACGACGGT CCCTACTGGA TCCTGCGCGG CAACGGCGGC
ATCCTGTCCA CCGCGCGCGA CATGACCGCG TGGCACCGGG CACTGGACGG CGACGAGGTC
CTGTCGGCCA AGGCCAAACG GAAACTGTTC AAACCCCACG TCCCCGAGGA CGAGACCGGC
GAGTCCCACT ACGGCTACGG CTGGACGATC TCCACCGATG AGGCGGGCCG CAAGGTCGTG
TGGCACGACG GCGGCAACGA ATGGTCCTCG GCGATGATCG TCCGCTGTCC CGAAGCCGAG
ACGATGCTGT TCCTCGCGAG CAACGCGGCC GACTGGGGCG GCGACATGCA GACCCTGGCC
GTCGACATCC TGCCGTTGCT CGACGCATGA
 
Protein sequence
MNTRTRLSRR GLVATTVGAA SALAVGGGAW AWATSGHETI DEYLRDNLPD DASLAIVAVR 
GGKTLYRKGF GLADRKADIR CGHRTVFDIG SVTKQFTGAA ILRLDMDGAL KVSDPLSRHL
PGLPADKRKI TLHQLLTHTG GFTDLPDLSD YDEVDRSRLL SEFGDRELKW KPGTRYEYSN
LGYSVLAAVI EIVTSGNYEE YLADNLFHPA GMRHTGYLLP DWDPATVAQQ YDDKGRVMGK
PHELPWDDDG PYWILRGNGG ILSTARDMTA WHRALDGDEV LSAKAKRKLF KPHVPEDETG
ESHYGYGWTI STDEAGRKVV WHDGGNEWSS AMIVRCPEAE TMLFLASNAA DWGGDMQTLA
VDILPLLDA