| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_5142 |
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| Symbol | |
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| ID | 8886350 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | - |
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| Start bp | 5465730 |
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| End bp | 5467574 |
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| Gene Length | 1845 bp |
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| Protein Length | 614 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | |
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| Product | PDZ/DHR/GLGF domain-containing protein |
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| Protein accession | YP_003513870 |
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| Protein GI | 291302592 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.309432 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.441282 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGATC ATCACAGTGA TCCCTCCGCA TCGAAGCCGG ACGACGCCTC GTCCCGGCCG
GTGCCGCCAC TGTCCGACTC CGAGTCGGCC GCGTCCGGCG CTGAGCCGAC GCCGCAACAG
CCGTCCGCCG CTGCCACGGC CGACGCGCAC CAAACGTCCA CTGAGGCCGA CTCGGCGCTG
GCCGCCGCTG GCGGCGACGT GAGCCCGTCG GCCACCGCCG GCGAGCCGCA CGTGGGGGCC
GGAGCCGACG CCGACCGCTC GGCTGCCGCT TCGGCTGAGC CGCAGGCGGG GGCCACAAGC
GACTCCTCGG CCGAGCCGGG CGCGGGCGAG AGCCTGGCGC CGCACTGGCC CGAGCCGTCC
CAGGCCGCCG CGCCTGAACC GGCCACACTG GCCACGCCGT CTCCGGCCGG GTTCGATGCC
GGGGCGGCAT CGGCACCTGC CGAGCCCGGC GCGGGCGACG GCCAGCCGTC CGCGCCGCCG
CCGGGGCTGA CGCCGCGGTC GGGGGCCGTC GAGCCGTCGC TGGGCACGGC CGAGAACAAG
CCACCGCAGA CCCCGACCGG CACCGAACCC GCCACACTGG CCGCCGCGTC CGGTCCCGCC
GCCGGGCCGC GACCGCCGCA GGGACCCGGG CAGCGGCCGC CGATGCCGCC GGGCCTGACG
CCACCGCCGC CGGGAGCGCC GCCGACCAGC TCGTTCGCCG CGCCGGGCGC GCCGCCGCCC
GCGGGACCGC CGACGGGCCC GATCCCGGTG GGAGGCCCCG CCGGGCAACC CTTCGGGGGC
CCCGCGATGG CGCCGCCGAA GAAGAAGAGC AAGGCGCCCG CGCTGGTCGC CGCCGCCCTG
GTGCTCGCGC TGGGCGCGGG GACGGCGGGC GGTGTGGCCG GGTTCGCGCT GGCGGGACTC
GGCGGGGGCG GCGACTCGTC CTCGCCCTCG GAGCAGGTCG CCAACGGCGA CACCATCTCC
GACATCGCCA AGAAGGTGCA GCCGTCGGTG GTGTCCATCG CCACCGAGAA CGCCGGCGGC
TCGGGCGTCG TCTACGACGA CAAGGGCCAC ATCATCACCA ACAACCACGT CGCCGAGACC
GCCTCGGGCG GCAAGCTCGA GGTGACCTTC GCCGACGGCA CCACCTCGCA GGCCAGCGTC
GTGGGCACCG ACCCGGCCGG TGACCTCGCG GTCATCAAGG TCGACGACGT CGACAACCTG
ACCCCGATCA AACTGGGCGA CTCCGGGGCG CTGGACGTCG GCGACACCGT GCTGGCGATC
GGCTCGCCGC TGGGCCTGGA CGGCTCGGTG ACCTCGGGCA TCGTCTCGGC GCTGAACCGC
ACCGTGCAAG CCGGGGGCGG CGAGCAGGGC GGCAACGCCA CCACACTCAA CGGCCTGATC
CAGACCGACG CGGCCATCAA CCCGGGTAAC TCCGGCGGCG CGCTGGTCAA CGGCAAGGGC
GAACTGATCG GCATCAACAC CGTGATCGCC ACGACCGGCT CATCGGAGGG GAGCGTCGGT
CTTGGGTTCG CGATCCCGTC CGACACGGTC TCCTCCACGG TGGACCAGCT CATCGACGGC
GGCGACATCG AACACGGCTA CCTGGGCGTG AGCGTCGTCG ACAACGTCGA GGGCTCCGAG
GGCGCCGTCG TCAACAAGGT CGAGGACGGC AGCCCCGCCG ACAAGGCGGG CCTGAAGCGC
GGCGACGTCA TCACCTCCAT CGACGGTGAG AAGGTCGGCG GGGCGTCCGA TGTGGGCGCC
GTCGTCCAGG GCGCCAAGCC GGGCACCAAA GTAGACATCG AATACACCCG CAGCGGCAAG
AGTGACTCCA CATCGGCGGA ACTCGGTTCG ACATCGGGTG ACTGA
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| Protein sequence | MNDHHSDPSA SKPDDASSRP VPPLSDSESA ASGAEPTPQQ PSAAATADAH QTSTEADSAL
AAAGGDVSPS ATAGEPHVGA GADADRSAAA SAEPQAGATS DSSAEPGAGE SLAPHWPEPS
QAAAPEPATL ATPSPAGFDA GAASAPAEPG AGDGQPSAPP PGLTPRSGAV EPSLGTAENK
PPQTPTGTEP ATLAAASGPA AGPRPPQGPG QRPPMPPGLT PPPPGAPPTS SFAAPGAPPP
AGPPTGPIPV GGPAGQPFGG PAMAPPKKKS KAPALVAAAL VLALGAGTAG GVAGFALAGL
GGGGDSSSPS EQVANGDTIS DIAKKVQPSV VSIATENAGG SGVVYDDKGH IITNNHVAET
ASGGKLEVTF ADGTTSQASV VGTDPAGDLA VIKVDDVDNL TPIKLGDSGA LDVGDTVLAI
GSPLGLDGSV TSGIVSALNR TVQAGGGEQG GNATTLNGLI QTDAAINPGN SGGALVNGKG
ELIGINTVIA TTGSSEGSVG LGFAIPSDTV SSTVDQLIDG GDIEHGYLGV SVVDNVEGSE
GAVVNKVEDG SPADKAGLKR GDVITSIDGE KVGGASDVGA VVQGAKPGTK VDIEYTRSGK
SDSTSAELGS TSGD
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