Gene Snas_5138 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5138 
Symbol 
ID8886346 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5459543 
End bp5460445 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content74% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003513866 
Protein GI291302588 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.238921 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGGTTC GCAAGGAATT CGATGAGGCC ACGGCCGCGC ACCGTGCGGC GGCCGGGCAC 
CTGGAGCGGG CCCGCGCCCT GCTTCCCAAG CACGGCAAAG CACCGGTGAC CGACCGGCAG
CGCGCGCTGG TGACCCGGTT GGCCCAGGCG GCGTTGGCCG CGACGCCCGG TTGGCTGGGG
CATCGGCTGA CCGGTGCCAT GCCCGGGGTG CCGTTGGGTG AGGCCGACGC GGCGCAGCCG
TTGTCGGTGC GGGTCGGCGA GTGCCGTCTC GACGACGACC ACCGGTTCCC CGCCGTGGTC
AACCTGCTCG GTACCGGGCA TCTGGCCGTG GACGCCGACG CCACCGATCC CCGGGCGATG
TCGCTGCTGC GGTCGGTGCC GCTGCGGCTG TTGGCCGCCC GGCCGTCGGA GACCCTCAAC
GTCTCGTTCG TGGACTGCTG TCTGGACGGC GAGGTGTTCG CGCCGTTCGG GCCGCTGGTC
GAGGCGGGGC TGGCTCCGGA GGTCGCCACC GGCGAGATCG GGCTGGCCGG GGTACTCGAC
ACCGCCGAGG CGCACCTGGA CCACGCCCGC CGACGCGGGG GCGCCGCCGC CGACCTGCCG
GAACGGCTGG TCGTGATCGC GGGGCTGCCG CCGGAACCGG GCGCGGTGAC GGCGCGGCTG
GCGAACCTGA TCGCGTCCGG CCCCGAGGCG CGACTGCACC TGGTCCTCGC CGACGCGCGC
GTCCGGCCGA ACCGCTCGGG CACCCGCACC ACGCATGTCA GCCTGTCCGG CGACCGCGCC
ACCGTCGCGG GGATTCCGCT GCCGGTGCGC GTCGACGCCG AACCCGAGCC TGAACTCATC
ACCGAACTGT GCGGCAGGCT CGCCGCCAAC CGGCAGTGGG TCATTGAGGA CGATCTGACG
TGA
 
Protein sequence
MKVRKEFDEA TAAHRAAAGH LERARALLPK HGKAPVTDRQ RALVTRLAQA ALAATPGWLG 
HRLTGAMPGV PLGEADAAQP LSVRVGECRL DDDHRFPAVV NLLGTGHLAV DADATDPRAM
SLLRSVPLRL LAARPSETLN VSFVDCCLDG EVFAPFGPLV EAGLAPEVAT GEIGLAGVLD
TAEAHLDHAR RRGGAAADLP ERLVVIAGLP PEPGAVTARL ANLIASGPEA RLHLVLADAR
VRPNRSGTRT THVSLSGDRA TVAGIPLPVR VDAEPEPELI TELCGRLAAN RQWVIEDDLT