Gene Snas_5135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5135 
Symbol 
ID8886343 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5456892 
End bp5458073 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content71% 
IMG OID 
Productoxidoreductase domain-containing protein 
Protein accessionYP_003513863 
Protein GI291302585 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.575557 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.344345 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGGTC TCGGCCTGCG CAAGACCCTG GCCGTCGAAG CCCACCGCCC CGGCTCCGGA 
GCCCGCGTCA CCACCGTGTG CGACCCGGAC CCGGCCGTCT ACGACTGGGC CCGCGCCAAC
TTCGGCGACG ACGTGCGCAC CGTCGCCGAC TTCGACGAAC TGCTGGACGC CGACCTCGAC
GCCGTCCTGG TGCTCACCCC CGACCACACC CACATCGACC TGGGTGTGCG GGCGCTGACC
GCCGGGGTGC CCACGTTCAT GGAGAAGCCG CTGGCCACCA CGATCGGCGA CTGCGACACG
CTGCTGGACA CCGCGCACCG CACCGGCACC CGGCTGTACG TCGGCCACAA CATGCGCCAC
ATGCCGGTGA TCCGCACGAT GCGCGAGGTC ATCGCCTCCG GCGCGATCGG CGAGGTCGAG
GCGGTCTGGT GCCGCCACTT CGTCGGCCAC GGCGGCGACT TCTACTACAA GGACTGGCAC
GCCGACCGCC GCAACACCAC CGGGCTGCTG CTGCAGAAGG GCGCCCACGA CATCGACGTC
ATTCACTGGC TCGCGGGCGC GTCGACCCGG CAGGTCACCG CCATGGGCAA GCTCAGCGTC
TACAACCGCG TCACCGACCG GCAATCGGCT CCCGGCCAAC GCCCCGACGA CTGGTACGCC
CCGGACAGCA ACTGGCCGCC GCTGTCGCAG ACCGGGCTGC ACCCGGTCGT CGACGTGGAG
GACCTGTCGA TGATGCTGAT GCGCCTCGAC AACGGCGTGC AGGCCAGTTA CCAGCAGTGC
CACTACACCC CCGACTACTG GCGCAACTAC ACCGTCATCG GCACCGCCGG ACGGCTGGAG
AACTTCGGCG ACACCGGCGG CAACGCCGTG GTGCGGGTGT GGAACTCCGG CCGCCGCGGC
TACGACGCCG AGGGCGACCG GACCATCGAG ATCCCCACGG CCACCGGCGG GCACGGAGGT
GCCGACACGG CGCTCATCGA CGAGTTCCTG CGGTTCGTCC GCGACGGCGG CGCCACCGAC
ACCTCGCCGG TCGCGGCCCG CGACTCGGTC GCCGCCGGGG TAGCCGCGAC GGAATCGCTG
CGCGCGGGCG GGACCGCGCG CGAGGTGGCG CCGGTATCGG AGCCGCTGAC CTCGTACTTC
AACTCGGGGC AACCATCCCG TACCCAAAAC CCGTCCGTTT AG
 
Protein sequence
MAGLGLRKTL AVEAHRPGSG ARVTTVCDPD PAVYDWARAN FGDDVRTVAD FDELLDADLD 
AVLVLTPDHT HIDLGVRALT AGVPTFMEKP LATTIGDCDT LLDTAHRTGT RLYVGHNMRH
MPVIRTMREV IASGAIGEVE AVWCRHFVGH GGDFYYKDWH ADRRNTTGLL LQKGAHDIDV
IHWLAGASTR QVTAMGKLSV YNRVTDRQSA PGQRPDDWYA PDSNWPPLSQ TGLHPVVDVE
DLSMMLMRLD NGVQASYQQC HYTPDYWRNY TVIGTAGRLE NFGDTGGNAV VRVWNSGRRG
YDAEGDRTIE IPTATGGHGG ADTALIDEFL RFVRDGGATD TSPVAARDSV AAGVAATESL
RAGGTAREVA PVSEPLTSYF NSGQPSRTQN PSV