Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_5131 |
Symbol | |
ID | 8886339 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 5453069 |
End bp | 5453974 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003513859 |
Protein GI | 291302581 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.135595 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.223967 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACGCGG CGATCATCGC GCAGGATCTG CGGAAACGGT ACGGGGACCT GGCCGCGGTG GACGGGGTCT CCTTCGAGGT CGCCAGCGGC GAGTTCTTCG GCATCCTCGG CCCCAACGGG GCGGGCAAGA CCACCACCGT GGAGATCGTC GAGGGGCTGC GCAAACCCGA TTACGGCACC GTGAGCCTGC TGGGTGTCTC GCCCTGGCCG CACGATCGCG ACCTCAGCCG CCGCGTCGGC GTCCAGTTGC AGGCCACCGC GTTCTTCGAG CGGCTGACGG CCCGCGAACA GCTGCACACC TTCGCCGACC TGTACGGGGT GGCGGCCAGC CGCGCCGACG AGATGCTGGA ACAGGTGGGG CTCACCGAGA AGGCCGCGAC CCGGATCGAG AAGCTGTCCG GCGGGCAAGC GCAGCGGCTG TCGATCGCCT GCGCCCTGGT GCACGATCCG GAGCTGGTGT TCCTGGACGA ACCGACCGCC GCGCTGGACC CGCAGGCGCG CCGCAACCTG TGGGATCTGT TGCGGCAGGT CAACTCCGCC GGACGCACCG TCGTGCTGAC GACGCACTAC ATGGACGAGG CCGAGTCGCT GTGCGACCGG GTGGCCATCA TGGACCACGG CAAGGTGCTC AAGGTCGACA CGCCCGCGAA CCTGGTGCGC GACCTCAACG CCGCCACCCA CATCTCCGTG TCAAGTGGAC ACCTGTCGGC GGAACAGGCC GCGGTCATCG CCGACGGCGT CGCCGAGGTC GACGACGACG GCATGGATCT GCGCTTCACC ACCCACGAAC CCTCCGCCGT GCTCACCGCG CTCGCCGAGC AGTCCGCATT GGACGGCCTG CGGGTGCGGG GGGCGACCCT GGAGGACGTC TTCCTCGAAC TGACCGGACG GGAGTACCGC GCGTGA
|
Protein sequence | MDAAIIAQDL RKRYGDLAAV DGVSFEVASG EFFGILGPNG AGKTTTVEIV EGLRKPDYGT VSLLGVSPWP HDRDLSRRVG VQLQATAFFE RLTAREQLHT FADLYGVAAS RADEMLEQVG LTEKAATRIE KLSGGQAQRL SIACALVHDP ELVFLDEPTA ALDPQARRNL WDLLRQVNSA GRTVVLTTHY MDEAESLCDR VAIMDHGKVL KVDTPANLVR DLNAATHISV SSGHLSAEQA AVIADGVAEV DDDGMDLRFT THEPSAVLTA LAEQSALDGL RVRGATLEDV FLELTGREYR A
|
| |