Gene Snas_5131 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5131 
Symbol 
ID8886339 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5453069 
End bp5453974 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content70% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003513859 
Protein GI291302581 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.135595 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.223967 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCGG CGATCATCGC GCAGGATCTG CGGAAACGGT ACGGGGACCT GGCCGCGGTG 
GACGGGGTCT CCTTCGAGGT CGCCAGCGGC GAGTTCTTCG GCATCCTCGG CCCCAACGGG
GCGGGCAAGA CCACCACCGT GGAGATCGTC GAGGGGCTGC GCAAACCCGA TTACGGCACC
GTGAGCCTGC TGGGTGTCTC GCCCTGGCCG CACGATCGCG ACCTCAGCCG CCGCGTCGGC
GTCCAGTTGC AGGCCACCGC GTTCTTCGAG CGGCTGACGG CCCGCGAACA GCTGCACACC
TTCGCCGACC TGTACGGGGT GGCGGCCAGC CGCGCCGACG AGATGCTGGA ACAGGTGGGG
CTCACCGAGA AGGCCGCGAC CCGGATCGAG AAGCTGTCCG GCGGGCAAGC GCAGCGGCTG
TCGATCGCCT GCGCCCTGGT GCACGATCCG GAGCTGGTGT TCCTGGACGA ACCGACCGCC
GCGCTGGACC CGCAGGCGCG CCGCAACCTG TGGGATCTGT TGCGGCAGGT CAACTCCGCC
GGACGCACCG TCGTGCTGAC GACGCACTAC ATGGACGAGG CCGAGTCGCT GTGCGACCGG
GTGGCCATCA TGGACCACGG CAAGGTGCTC AAGGTCGACA CGCCCGCGAA CCTGGTGCGC
GACCTCAACG CCGCCACCCA CATCTCCGTG TCAAGTGGAC ACCTGTCGGC GGAACAGGCC
GCGGTCATCG CCGACGGCGT CGCCGAGGTC GACGACGACG GCATGGATCT GCGCTTCACC
ACCCACGAAC CCTCCGCCGT GCTCACCGCG CTCGCCGAGC AGTCCGCATT GGACGGCCTG
CGGGTGCGGG GGGCGACCCT GGAGGACGTC TTCCTCGAAC TGACCGGACG GGAGTACCGC
GCGTGA
 
Protein sequence
MDAAIIAQDL RKRYGDLAAV DGVSFEVASG EFFGILGPNG AGKTTTVEIV EGLRKPDYGT 
VSLLGVSPWP HDRDLSRRVG VQLQATAFFE RLTAREQLHT FADLYGVAAS RADEMLEQVG
LTEKAATRIE KLSGGQAQRL SIACALVHDP ELVFLDEPTA ALDPQARRNL WDLLRQVNSA
GRTVVLTTHY MDEAESLCDR VAIMDHGKVL KVDTPANLVR DLNAATHISV SSGHLSAEQA
AVIADGVAEV DDDGMDLRFT THEPSAVLTA LAEQSALDGL RVRGATLEDV FLELTGREYR
A