Gene Snas_5130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5130 
Symbol 
ID8886338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5451480 
End bp5453036 
Gene Length1557 bp 
Protein Length518 aa 
Translation table11 
GC content71% 
IMG OID 
Productserine/threonine protein kinase with PASTA sensor(s) 
Protein accessionYP_003513858 
Protein GI291302580 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0565421 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.352944 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCACG CTGGTGACGT GCTGGCGGGA AGGTACCAGC TGCTCGAACG CGTGGGCGGC 
GGCGGCATGG GCGATGTGTG GCGCGGTGAG GACCTCTTGC TGCGACGGAC GGTCGCCGTG
AAGGTATTGC TGGCGAAGCT CGCCGACGAA CGCAACTTCC GGGAACGGTT TCTGCGCGAG
GCACAGGCCA TCGCCACTCT TGAGGGCCCC GGGATCGTCG ACGTCTACGA CTTCGGCGAG
GAGGTCGTCG CCAACGGCAC CATCTCCTAC CTGGTCATGC AGTTCGTGGA CGGGATGGCG
CTGTCGCGAC GGCTCGCGGG CTGGGGCCGT CTGAACACTC AGGACACTCT GCGGATCGTG
TCGCAAGTGG CCGATTCGCT GGAGATCGCG CACCGCTCCG GGATCATCCA CCGCGATGTC
AAGCCCGGCA ACATCCTGGT GCGCGAGGAC GGCCGGGTGG TGCTGGTGGA CTTCGGGATC
GCCCGCACCG AGACGAACCT GACCATGACC ACCACCGGAG TGGTGCTGGG GACGGTCACC
TACATGTCCC CCGAACAGGC CTCCGGCGAG AAGCTCGGAC CGGCCTCCGA CATCTACTCG
CTCGGCGTCG TGGCGCACCA GTGCCTGGCC GGGCATCCGC CGTTCAAGGC CGACACGCCG
CTGGGCGTGC TGTCGGCGCA CCTGCGCAAC GTCCCGCCCC GGCTGCCCGC CGACGTGCCG
CAGCCGGTGC CCAACCTGAT CCTGCGCGCC ATGGCCAAGG AACCGCACGC GCGCTGGCAG
ACCGCCGGTG AGTTCGCCGA CGCCTGCCGC GGCGCCACCG CCGAACCGGT GACGCCGGTG
CCCGAACTCG CCGGGGCCGT CACCACGGTG ATCCCCCGGG TGCGGCAGCC CGGGCCGGTC
GCGGCCGCCG CCCCGATCCC GGCCACCGCC GCGCCGCTGC CCCAGATCGG TTTCGACGCG
CCCCGGCAGC GCACCGGGCC GCCGACCCCT CCCCCGCCGA CGCCGCCGGA GGAGACCACC
GGCGGTCAGA AACCGCCGAA ACGCCGCCGC ACCAAGTACC TCGTGTACAT CGCGGCGCTG
ATCCTCGTGC TGCTGGGCAC CGCCACGATG ACACTGTGGC CGCTGGATCA CATCAGCAGC
AACCTTCCCG GCGCCGTCGA CGAGGCCTCC CGCTCGGCGG GCGCACCCGG CGGGCAGGAC
GACGCGCAGC CCGGCGGCAA GGGCGACTCC GGATCCAAGG AGAAGTCCAA GAAAAAGAAG
AAGTCGCCGT CGCCGGGCGC CAAGGACTCC GGCAGCGCCA GCGACGAGGC CTCGACCTCG
GCGTCCTCGC CGGTCCCCGA CACGGTGGCC GTCCCCGACG TCATCAACAA GACCGAGGCG
GACGCCCGCA GCGCGCTGAC CGCCGCCGAC CTGCGTCCGG CGATCATCTA CGAGGGCGAG
GGCGACAACA TCTGCTCGGT CATCAGCCAG GACCCGCCGG GCGGACGGCA GCTCAAACGC
GGTTCGACCG TCACGGTGAC GGTGCGCAAG GCCAAGGAAG GCTGCGACAA GAACTGA
 
Protein sequence
MLHAGDVLAG RYQLLERVGG GGMGDVWRGE DLLLRRTVAV KVLLAKLADE RNFRERFLRE 
AQAIATLEGP GIVDVYDFGE EVVANGTISY LVMQFVDGMA LSRRLAGWGR LNTQDTLRIV
SQVADSLEIA HRSGIIHRDV KPGNILVRED GRVVLVDFGI ARTETNLTMT TTGVVLGTVT
YMSPEQASGE KLGPASDIYS LGVVAHQCLA GHPPFKADTP LGVLSAHLRN VPPRLPADVP
QPVPNLILRA MAKEPHARWQ TAGEFADACR GATAEPVTPV PELAGAVTTV IPRVRQPGPV
AAAAPIPATA APLPQIGFDA PRQRTGPPTP PPPTPPEETT GGQKPPKRRR TKYLVYIAAL
ILVLLGTATM TLWPLDHISS NLPGAVDEAS RSAGAPGGQD DAQPGGKGDS GSKEKSKKKK
KSPSPGAKDS GSASDEASTS ASSPVPDTVA VPDVINKTEA DARSALTAAD LRPAIIYEGE
GDNICSVISQ DPPGGRQLKR GSTVTVTVRK AKEGCDKN