Gene Snas_5128 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5128 
Symbol 
ID8886336 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5448200 
End bp5450422 
Gene Length2223 bp 
Protein Length740 aa 
Translation table11 
GC content67% 
IMG OID 
ProductMMPL domain-containing protein 
Protein accessionYP_003513856 
Protein GI291302578 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTCGCAG GCTGGGGCCG CGCCGTAGTG AGACTGCGGT GGGCCATTCT GCTACTCGGC 
GCGGGAGTCA TCGCGCTAGG AGCGACGTGG GGTGCCGGGG TATTCGACTC TCTGTCCGAC
GGCGGCTTCT ACAACGACAA GTCCCCGAGC GCCAAGGCCG AGGACCACAT CGAGGACGAG
TTCGGCCGTC AGGACACCGA CGTGGTGGCC CTGTACGAGT CGAAGGACGA CAAGGTCACC
GACGCCGACT TCGCCGAGTC CGTCACCGAC GTCATCGCCG ACGTCGAGGA CCGTGACGAG
GTCGAGAAGG TCTCCTCCTG CTACGCCGAC AAGATCGTCG AGGGCGACCC CCGCACCGAC
CCCAAGGTGA CCTGCGGCGA GATCGACGAC GACCCCAACC CCTTCGTGTC CGACGACGAC
CACTCCACCT ACGTGGCCAT CACCCTCAAC GGCGAGGACG ACGCCGCCCG GGCCGAACAG
TTCGAGGACA TCCGCGACGA CCTCAAGGCC GAGGGCCTGA CCACGACGCT CGGCGGCCAG
GCGGCGATAT TCGACGACGT CAACACCCAG ACCAAGGCCG ACATGGTCAC CGCCGAGACC
TACTCGATGC CGATCCTGCT GGGCCTCATG ATCATCATCT TCGGCAGCCT GGTCGCGGCC
ACCACCCCGC TGCTGGTGGG CGTGCTGGCG ATCATGGGCG GCTTCATCAT CACCCGCCTG
CTCACCTACG TCACCGACGT GTCGGTGTTC GCGATCAACG TCATCACGAT CATCGGCCTG
GGCCTGGCCA TCGACTACGC CCTGTTCGTC GTCAACCGGT TCCGCGAGGA ACTCGACAAC
GGCCAGACCA AGAAGGACGC GGTGTCCCGC ACCATGGCCA CGGCGGGCCG CACCGTCATG
GTCTCCGGCC TCACCATCAT CCTGTCGCTG GCCGGACTGC TGCTGTTCCC GCTGCCGTTC
CTGCACGGCA TCGCCTACGG CGGCATGGCC GCGGTCGCGG TGGCCATGCT CGGCTCCCTG
ACCGTGCTGC CCGCCCTGCT CGCGGTGCTG GGCCACCGCG TCGACGCCGT CCGCATGCCC
TGGCGCCGCA AGGGCAAGAA GGTCACCAAG GAACGCGGCG TCTGGTCGAA GATCGGCGGC
AGCGTCATGC GCCGTCCCGC GCTCTACATC ATCGGCGTCC TGGCGATCCT GGCCGTCTTG
GCCAGCCCGT TCCTCAACGC CGCCTTCGGA ACCGTCGACG AGAAGGTCCT CCCGTCGGGC
ACCGAGAGCC GCACCGTCAC CGAGACGATG GAGAAGGACT TCCCCAACGG CAAGGACGGC
ACCCTGACGA TCTTCGTCGA CGGCGGGGGC GACGTCTCGC TGGCGCAGAC CATAGAGGAC
GTCGAGGACC TCGACCTCGT CGAAGCGGTC ACCCCCCTGG AGTCCAACCT CGACTCAGCG
GTCCTGCAGG TCCGCTACGA CGCCGACGCC CAAAGCCCCG AGGCCCGCGA TCTCGCCGAC
GAGATCCTCG CCCTCGAACC TCCGACACAG GGCACGGTCG AGGTCACCGG CATGCCGGCC
CAGCTCAACG ACCAGTTCTC CGACATCGGC GAACGCCTCC CCTGGCTGGG CCTGTACGTC
GCGGCGGTGA CCCTGCTGCT GCTCTTCCTG GCCTTCGGCT CGATCCTGTT GCCGCTCAAA
GCGATCCTGA TGAACATCGT CTCCATCGGA GCGTCCTTCG GCGTCATCGT GTGGATCTTC
CAGGAAGGCC ACCTGTCCAA CCTCCTGGGC TTCACCCCCT CGGGCTACCT GGAACCGTCC
AACCTGTTGC TCATGGTCGT CCTCCTGTTC GGACTCTCCA CCGACTACGA GGTCTTCCTA
CTGTCCCGGG TCCGCGAGGA ATGGGACCGC ACCGGTGACA ACACCGCCTC GGTGCTCACC
GGACTCCAGC GCACCGGCGG CATCATCACC TCCGCCGCCC TCCTGCTGAT CGTCGTCGTG
GTCTCCTTCG CCATGGGAGG CATCGTCTTC CTGAAGATGA TCGGCATCGG CATGGCGGTG
GCGATCTTCG TCGACGCGAC CCTGGTCCGC ATGCTCCTGG TCCCCGCGAC CATGCGCATC
CTGGGGCGCG CCAACTGGTG GGCACCCCGG TTTCTCGGCA TCTTCTACGC GAAGTACGGC
GTGAAGGAAG GCGAAGACCC CGAACCCGCC CCCGAGCGCG AACTGGTGGG CGCCGGAAAG
TAA
 
Protein sequence
MFAGWGRAVV RLRWAILLLG AGVIALGATW GAGVFDSLSD GGFYNDKSPS AKAEDHIEDE 
FGRQDTDVVA LYESKDDKVT DADFAESVTD VIADVEDRDE VEKVSSCYAD KIVEGDPRTD
PKVTCGEIDD DPNPFVSDDD HSTYVAITLN GEDDAARAEQ FEDIRDDLKA EGLTTTLGGQ
AAIFDDVNTQ TKADMVTAET YSMPILLGLM IIIFGSLVAA TTPLLVGVLA IMGGFIITRL
LTYVTDVSVF AINVITIIGL GLAIDYALFV VNRFREELDN GQTKKDAVSR TMATAGRTVM
VSGLTIILSL AGLLLFPLPF LHGIAYGGMA AVAVAMLGSL TVLPALLAVL GHRVDAVRMP
WRRKGKKVTK ERGVWSKIGG SVMRRPALYI IGVLAILAVL ASPFLNAAFG TVDEKVLPSG
TESRTVTETM EKDFPNGKDG TLTIFVDGGG DVSLAQTIED VEDLDLVEAV TPLESNLDSA
VLQVRYDADA QSPEARDLAD EILALEPPTQ GTVEVTGMPA QLNDQFSDIG ERLPWLGLYV
AAVTLLLLFL AFGSILLPLK AILMNIVSIG ASFGVIVWIF QEGHLSNLLG FTPSGYLEPS
NLLLMVVLLF GLSTDYEVFL LSRVREEWDR TGDNTASVLT GLQRTGGIIT SAALLLIVVV
VSFAMGGIVF LKMIGIGMAV AIFVDATLVR MLLVPATMRI LGRANWWAPR FLGIFYAKYG
VKEGEDPEPA PERELVGAGK