Gene Snas_5124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5124 
Symbol 
ID8886332 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5444533 
End bp5445231 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content65% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003513852 
Protein GI291302574 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGGAACA GCGATGTGGA TGGTGTCGCA CTGGAAATAA CCGAGCTGGA CTATGCCATC 
GGCAATCGCC GGTTGTTCTC CGGACTGGAG CTGTCGGTGG CCATTGGGGA GACCTTGGCG
GTGCTGGGTC CCAGCGGCTC CGGCAAGTCG ACCTTGTTGT CGTGTGTATT GGGGCTGCTG
CGACCGGATC GGGGTTCGGT GCGGGTGGCC GGTACCGAGA TCACCAAGCT GGGTTCGCGG
GGCCTGGCCA AGACACGGGC CGAGTCGATC GGGATGGTGT TCCAGTTCGG AGAGTTGCTG
CCGGAGCTCA GTCCGGTGGA GAACGTCGCC TTGGCGGCTA TGTTGGCGCG CAAGGCATCG
GCCGACATCT ACCAGCGCGC TCAGGCGCTG CTGGATGAGC TCGGGGTGCC GGAGGCCAAG
ACGAGCGCCT CGCTGTCGGG CGGAGAACGG CAACGCACCG CGGTGGCCCG AGCGCTCATC
AACTCTCCGG TGCTGCTGTT GGCCGATGAG CCGACCGGTG CCCTGGACGC CGAAGCCCGT
GACAAGACCG CTGGCATGTT GTTCGACGTG CCCAAACGCC ACTCCTGCGG AATGCTGCTG
GTGACGCACG ACCTGGCGGT GGCGGCACGA GCGGATCGCG TGGTGAGCAT CGTTGACGGC
GCGCTGGAAA CCGTTTCGAT CAAGGAGGCC GTTTCGTGA
 
Protein sequence
MRNSDVDGVA LEITELDYAI GNRRLFSGLE LSVAIGETLA VLGPSGSGKS TLLSCVLGLL 
RPDRGSVRVA GTEITKLGSR GLAKTRAESI GMVFQFGELL PELSPVENVA LAAMLARKAS
ADIYQRAQAL LDELGVPEAK TSASLSGGER QRTAVARALI NSPVLLLADE PTGALDAEAR
DKTAGMLFDV PKRHSCGMLL VTHDLAVAAR ADRVVSIVDG ALETVSIKEA VS