| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_5121 |
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| Symbol | |
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| ID | 8886329 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | - |
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| Start bp | 5438685 |
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| End bp | 5439902 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | |
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| Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| Protein accession | YP_003513849 |
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| Protein GI | 291302571 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.818961 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.304528 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCGCGACA ATGGCCGCGT GACCACTCGT GACGTCGTAC TGCTCGGTTC CACCGGTTCC
ATCGGGACGC AGGCCATCGA GGTGGCCCAG GCGAACCCCG ACAAGTTGCG CATCGTGGGG
ATTGGGGCGC AGGGGTCCAA CCCCGGGTTG TTGGCCGAGC AGGCGCTCGG GCTCGGGGTG
GATGTGGTGG CCATTCATCG GTCTTGTGCC GCCCAGGAGT TGCAGCTGGC GTTTTACGCT
GTGGCGGAGA AGAACGGGTA TTCCAAGGGC GAGTATCGGT TGCCGAAGAT CATTGCCGGG
CCTACCGCTA TGGAGGAGCT GGCGGCTTGG CCTTGTGACA CCGTGTTGAA CGGGATTACG
GGGTCGATCG GGTTGGCGCC CACGTTGGCC GCGTTGAAGG CGGGGCGGAC GTTGGCGTTG
GCCAACAAGG AGTCGCTGGT CGCCGGTGGG GCGTTGGTGC GGGGGTTGGC CGAGCCGGGG
CAGATCGTGC CCGTGGACAG TGAGCATTCG GCGTTGGCCC AGTGTCTGTG GAGTGGGAAG
GCCGAGGAGG TGCGGCGGTT GGTCGTGACC GCCAGCGGGG GGCCGTTTCG GGGGAGGACT
CGGGACGAGT TGGCCGATGT GACGGTGGAG CAGGCGCTGG CGCACCCGAC GTGGGCCATG
GGGCCGGTGG TGACGATCAA CTCGGCCACG ATGGTGAACA AGGCGCTTGA GGTCATTGAG
GCCCATGAGT TGTACGGCAT CGGGTATGAC GACATCGCTG TGATGGTGCA TCCGACGTCG
GTGATTCATT CGATGGTGGA GTTCGTGGAC GGGTCGACGA TCGCGCAGGC GTCGCCGCCC
GACATGAAGT TGCCGATCGC GTTGGCGCTG GCGTGGCCGA GAAGGTTGGC GGGGGTGGCG
AAGGCCGTGG ACTGGACGCG GTCGCACACC TGGGAGTTCT TCCCGTTGGA TGACGAGGCG
TTTCCGGCGG TGAACCTGGC GCGGGAGGCG GGTAGGACGG GGCGGTGCCT GCCCGCGATC
TACAACGCGG CGAACGAGGA GTGCGTGGAC GCGTTCACTA AGGGTGAGCT GCCGTTCTTG
GGGATCGTCG ACACTGTGGC GGAGGTCCTA GCGGCCACGC CCGGATTTGA CGAACCAGGT
ACCGTCGATG ACGTGCTGGC GGCCGAGAAG TGGGCGCGAG ACACGGCGCG CGAACGGATC
GCGCGGGTGG CGAAGTGA
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| Protein sequence | MRDNGRVTTR DVVLLGSTGS IGTQAIEVAQ ANPDKLRIVG IGAQGSNPGL LAEQALGLGV
DVVAIHRSCA AQELQLAFYA VAEKNGYSKG EYRLPKIIAG PTAMEELAAW PCDTVLNGIT
GSIGLAPTLA ALKAGRTLAL ANKESLVAGG ALVRGLAEPG QIVPVDSEHS ALAQCLWSGK
AEEVRRLVVT ASGGPFRGRT RDELADVTVE QALAHPTWAM GPVVTINSAT MVNKALEVIE
AHELYGIGYD DIAVMVHPTS VIHSMVEFVD GSTIAQASPP DMKLPIALAL AWPRRLAGVA
KAVDWTRSHT WEFFPLDDEA FPAVNLAREA GRTGRCLPAI YNAANEECVD AFTKGELPFL
GIVDTVAEVL AATPGFDEPG TVDDVLAAEK WARDTARERI ARVAK
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