| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_5119 |
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| Symbol | |
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| ID | 8886327 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | - |
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| Start bp | 5436180 |
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| End bp | 5437349 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | |
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| Product | 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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| Protein accession | YP_003513847 |
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| Protein GI | 291302569 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.83747 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.140007 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCTG TGAGTCTTGG TATCCCGCAA GCACCTCCGC CCGCTCTGGC CGAGCGCCGC
AAGACGCGTG CCCTGAACGT GGGCGGCGTG ATCGTGGGTG GCGGCGCGCC GGTGAGTGTC
CAGTCGATGA CCACCACCGT CACCGCCGAC ATCAACGCCA CGTTGCAGCA GATCGCCGAA
CTGACCGCCT CGGGCTGCCA GATCGTGCGG GTCGCGGTGC CGAGTCAGGA CGACGCGGAA
GCGTTGCCCG CCATCGCGAA GAAGTCGCAG ATCCCCGTCA TCGCCGACAT CCACTTCCAG
CCGAAGTACG TGTTCGCCGC GATCGACGCC GGTTGTGCTG CGGTGCGCGT CAACCCGGGC
AACATCCTGA AGTTCGACGA CAAGATCGGC GAGATCGCCA AGGCCGCGCA GGCCGCCGGC
ACCCCGATCC GGATCGGCGT CAACGCCGGG TCGCTGGACA AGCGGTTGCT GACCAAGTAC
GGCAAACCGA CCGCCGAGGC ACTGGTGGAG TCGGCGCTGT GGGAGTGCTC GCTGTTCGAG
GAGCACGGTT TCCGCGACAT CAAGATCTCC GTCAAGCACA ACGACCCCGT GGTCATGGTG
CGGGCGTACC GGCTGCTGTC GCAGCAGTGC GACTATCCAC TGCACCTGGG CGTCACCGAG
GCCGGGCCGA CGTTCCAGGG CACCATCAAG TCGGCGACCG CGTTCGGCGC GTTGCTGTCC
GAGGGCATCG GGGACACGAT CCGGGTGTCG CTGTCGGCGC CGCCGGTCGA GGAGGTCAAG
GTCGGCAACG CGATCCTGGA GTCGCTGGGG CTGCGGGAGC GGGGCCTGGA GATCGTGTCG
TGTCCGTCCT GTGGCCGCGC CCAGGTGGAC GTGTACAAGC TCGCTGAAGA GGTGACCGCG
GGCCTGGAAG GGCTGCCGGT GCCGCTGCGG GTGGCCGTCA TGGGCTGTGT CGTCAACGGA
CCGGGTGAGG CGCGCGAGGC CGACCTGGGG GTCGCCTCCG GCAACGGCAA GGGCCAGATC
TTCGTCAAGG GCGAGGTCAT CAAGACCGTG CCGGAGTCGC TGATCGTGGA AACGCTGATC
ACCGAGGCAC TGCGGCTCGC CGACGAGATG GGCGCCGAGA TTCCCGAGGA ACTTCGCGAA
CTGGCAGGTC CGGTCGTAGA AGTGCACTGA
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| Protein sequence | MTAVSLGIPQ APPPALAERR KTRALNVGGV IVGGGAPVSV QSMTTTVTAD INATLQQIAE
LTASGCQIVR VAVPSQDDAE ALPAIAKKSQ IPVIADIHFQ PKYVFAAIDA GCAAVRVNPG
NILKFDDKIG EIAKAAQAAG TPIRIGVNAG SLDKRLLTKY GKPTAEALVE SALWECSLFE
EHGFRDIKIS VKHNDPVVMV RAYRLLSQQC DYPLHLGVTE AGPTFQGTIK SATAFGALLS
EGIGDTIRVS LSAPPVEEVK VGNAILESLG LRERGLEIVS CPSCGRAQVD VYKLAEEVTA
GLEGLPVPLR VAVMGCVVNG PGEAREADLG VASGNGKGQI FVKGEVIKTV PESLIVETLI
TEALRLADEM GAEIPEELRE LAGPVVEVH
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