Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_5111 |
Symbol | |
ID | 8886319 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 5427220 |
End bp | 5428536 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | peptidase M16 domain-containing protein |
Protein accession | YP_003513839 |
Protein GI | 291302561 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.591794 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0978001 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCCGCG CTTTCACACG AACGCTCGCG GACGACCCGC TGGGCGGCAC GGTGCGCCGC ACCGTGTTGC CGGGCGGGCT TCGCGTTCTC ACCGAGTCGA TCCCGGCCAT GCGTTCCGCT TCGGTGGGCG TGTGGGTCGG CATCGGCTCC CGCGACGAGT CGCAGCAGCT GTCGGGGGCC TCGCACTTCC TGGAACACCT GTTGTTCAAG GGAACCAACC GCCGGTCCGC TTTGGACATA TCGGCGCAGA TCGAGGCCGT CGGCGGTGAG ACCAACGCGT ACACGGCCAA GGAGTTCACC TGCTACTACG CGCGGGTGCT CGACGAGGAC GTGCCGTTGG CCATCGACGT GCTGGCCGAC GTCATCACCG ACTCGAAGCT GGACGCCGAC GACGTCGAGA CCGAGCGGGG CGTGATCCTC GAGGAGATCG CCATGCAGCG CGACGAACCC GGCGACGAGG TGCACGACAT CTTCGCGGCC CTGATGTTCG GCGATCATCC ACTGGCGCAC GACATCTCGG GCACCCCCGC GAGCATCGAG GCGATGGACC GCGACCAGAT CCACCGCTTC TACAAGCGGC GCTACACCGC CCCGCACATG GTGGTGGCCG CGGCGGGCAA CGTCGATCAC GAGCAGGTCG TCACGCTGGT ACAGAAGGGC TTCGCGCCAC TGTTGTCCGA CGTGGACGCC GAACCGGCGC CGCTGCGGGA CGAGACCGCC ACGGTGCCGC CCGCTCCCAC GCGGCTGCGG GTGGCGACCC GGGACTCCGA GCAGGCGCAC CTGGTGTTGG GCTGCCACGG GCTGGCCCGC CGCGACGAGC GCCGCTTCGC CTTCGAGGTG CTGGGCGGGA TCCTCGGCGG CGGCATGTCG TCGCGGCTGT TCCACCGGAT CCGCGAGGAC GAGGGGCTGG CCTATTCGGT GTTCTCGTCC ACGTCCGAAT ACGCCGAGAC CGGACTGTTC AGCGTCTACG CCGGGTGCAC CCCCGACAAC GCCCACCGGG TCCTGGAACT GACCAACGAG GTCCTCGCCG AGATCGCCGC CGACGGTGTC ACCGCCTCCG AACTCAAGCG CGGCAAGGGA ATGGTGAAGG GCGGACTCGT CCTGGGCATG GAGGACACCG GTTCCCGGAT GGCCCGGCTG GGCCGGGGTG AACTGCTGTT CGGCGACAAG CTGACGGTGG ACGAGATCCT GGCGAAGGTG GACGCGGTGA CCCTGGCCGA CGTGGCCGAA CTGGCGGCCG TCGTGTTGAG CCGACCCCGT TCGCTGGCGG TGGCCGGTCC GTTCACCGAG TCCGATTTTT CCGGCCACGT ATCCTGA
|
Protein sequence | MTRAFTRTLA DDPLGGTVRR TVLPGGLRVL TESIPAMRSA SVGVWVGIGS RDESQQLSGA SHFLEHLLFK GTNRRSALDI SAQIEAVGGE TNAYTAKEFT CYYARVLDED VPLAIDVLAD VITDSKLDAD DVETERGVIL EEIAMQRDEP GDEVHDIFAA LMFGDHPLAH DISGTPASIE AMDRDQIHRF YKRRYTAPHM VVAAAGNVDH EQVVTLVQKG FAPLLSDVDA EPAPLRDETA TVPPAPTRLR VATRDSEQAH LVLGCHGLAR RDERRFAFEV LGGILGGGMS SRLFHRIRED EGLAYSVFSS TSEYAETGLF SVYAGCTPDN AHRVLELTNE VLAEIAADGV TASELKRGKG MVKGGLVLGM EDTGSRMARL GRGELLFGDK LTVDEILAKV DAVTLADVAE LAAVVLSRPR SLAVAGPFTE SDFSGHVS
|
| |