Gene Snas_5111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5111 
Symbol 
ID8886319 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5427220 
End bp5428536 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content69% 
IMG OID 
Productpeptidase M16 domain-containing protein 
Protein accessionYP_003513839 
Protein GI291302561 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.591794 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0978001 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGCG CTTTCACACG AACGCTCGCG GACGACCCGC TGGGCGGCAC GGTGCGCCGC 
ACCGTGTTGC CGGGCGGGCT TCGCGTTCTC ACCGAGTCGA TCCCGGCCAT GCGTTCCGCT
TCGGTGGGCG TGTGGGTCGG CATCGGCTCC CGCGACGAGT CGCAGCAGCT GTCGGGGGCC
TCGCACTTCC TGGAACACCT GTTGTTCAAG GGAACCAACC GCCGGTCCGC TTTGGACATA
TCGGCGCAGA TCGAGGCCGT CGGCGGTGAG ACCAACGCGT ACACGGCCAA GGAGTTCACC
TGCTACTACG CGCGGGTGCT CGACGAGGAC GTGCCGTTGG CCATCGACGT GCTGGCCGAC
GTCATCACCG ACTCGAAGCT GGACGCCGAC GACGTCGAGA CCGAGCGGGG CGTGATCCTC
GAGGAGATCG CCATGCAGCG CGACGAACCC GGCGACGAGG TGCACGACAT CTTCGCGGCC
CTGATGTTCG GCGATCATCC ACTGGCGCAC GACATCTCGG GCACCCCCGC GAGCATCGAG
GCGATGGACC GCGACCAGAT CCACCGCTTC TACAAGCGGC GCTACACCGC CCCGCACATG
GTGGTGGCCG CGGCGGGCAA CGTCGATCAC GAGCAGGTCG TCACGCTGGT ACAGAAGGGC
TTCGCGCCAC TGTTGTCCGA CGTGGACGCC GAACCGGCGC CGCTGCGGGA CGAGACCGCC
ACGGTGCCGC CCGCTCCCAC GCGGCTGCGG GTGGCGACCC GGGACTCCGA GCAGGCGCAC
CTGGTGTTGG GCTGCCACGG GCTGGCCCGC CGCGACGAGC GCCGCTTCGC CTTCGAGGTG
CTGGGCGGGA TCCTCGGCGG CGGCATGTCG TCGCGGCTGT TCCACCGGAT CCGCGAGGAC
GAGGGGCTGG CCTATTCGGT GTTCTCGTCC ACGTCCGAAT ACGCCGAGAC CGGACTGTTC
AGCGTCTACG CCGGGTGCAC CCCCGACAAC GCCCACCGGG TCCTGGAACT GACCAACGAG
GTCCTCGCCG AGATCGCCGC CGACGGTGTC ACCGCCTCCG AACTCAAGCG CGGCAAGGGA
ATGGTGAAGG GCGGACTCGT CCTGGGCATG GAGGACACCG GTTCCCGGAT GGCCCGGCTG
GGCCGGGGTG AACTGCTGTT CGGCGACAAG CTGACGGTGG ACGAGATCCT GGCGAAGGTG
GACGCGGTGA CCCTGGCCGA CGTGGCCGAA CTGGCGGCCG TCGTGTTGAG CCGACCCCGT
TCGCTGGCGG TGGCCGGTCC GTTCACCGAG TCCGATTTTT CCGGCCACGT ATCCTGA
 
Protein sequence
MTRAFTRTLA DDPLGGTVRR TVLPGGLRVL TESIPAMRSA SVGVWVGIGS RDESQQLSGA 
SHFLEHLLFK GTNRRSALDI SAQIEAVGGE TNAYTAKEFT CYYARVLDED VPLAIDVLAD
VITDSKLDAD DVETERGVIL EEIAMQRDEP GDEVHDIFAA LMFGDHPLAH DISGTPASIE
AMDRDQIHRF YKRRYTAPHM VVAAAGNVDH EQVVTLVQKG FAPLLSDVDA EPAPLRDETA
TVPPAPTRLR VATRDSEQAH LVLGCHGLAR RDERRFAFEV LGGILGGGMS SRLFHRIRED
EGLAYSVFSS TSEYAETGLF SVYAGCTPDN AHRVLELTNE VLAEIAADGV TASELKRGKG
MVKGGLVLGM EDTGSRMARL GRGELLFGDK LTVDEILAKV DAVTLADVAE LAAVVLSRPR
SLAVAGPFTE SDFSGHVS