| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_5105 |
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| Symbol | |
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| ID | 8886313 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | + |
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| Start bp | 5421973 |
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| End bp | 5422644 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | |
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| Product | transcriptional regulator, TetR family |
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| Protein accession | YP_003513833 |
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| Protein GI | 291302555 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000423081 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.55194 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGTGA CCAGGGATGA CATCGTGCGC GAGGCCGTCG AGCTGCTCAA GCAGGACGGC
CTGGACGCGT TGAGTCTGCG AAAACTGGCC GCCCGGCTGA AGATCACGGC CCCGACGCTG
TACTGGCACG TGGCGAACAA GCGCGAACTG CTGGACCTGG TGGCCGAGGA ACTGGTGCGG
GCGCAGCGTG AAACCCAGCT GCCCGAACCA CCGCCGGGCC AGCCATGGTG GGACTGGCTG
CGACTTCGCC TGTGGGACAT GTTCGACGCG CTCATCACGA TCCGCGACGC CCCCCGGGTG
CTGGCGGGCA ACCGGCCGCG GCTGGAATCG TTGAGCCACA TCGACCAGAC CCTCAAGACG
CTCATGGACG CCGGCCTGCC GCCCGCCGAC GCGCAGCAGG CGCTGTTCAC GCTCGGCTCA
TACGTCGTGG GTTCGGCGAT CGAATGGCAG GCCGAGGCCG ACCGCGCCCG CGAGGGCATC
GGCATCGACG CCGAGGTGGT CACGGCGATC AAGAGCGGCG AGTTCCCCCA CATCGAGATC
GCCATGCGCG GCGTCAACGA GCAGCCGCCC GAGGCCACCT TCGGGTTCGG GCTCGACCTG
CTCATCGACG CGCTGCGCGC CCGCTACGCG CCGGACCACG ACCGCGACAC CCCGCTGTCC
GTCGAGTCGT AA
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| Protein sequence | MSVTRDDIVR EAVELLKQDG LDALSLRKLA ARLKITAPTL YWHVANKREL LDLVAEELVR
AQRETQLPEP PPGQPWWDWL RLRLWDMFDA LITIRDAPRV LAGNRPRLES LSHIDQTLKT
LMDAGLPPAD AQQALFTLGS YVVGSAIEWQ AEADRAREGI GIDAEVVTAI KSGEFPHIEI
AMRGVNEQPP EATFGFGLDL LIDALRARYA PDHDRDTPLS VES
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