Gene Snas_5090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5090 
Symbol 
ID8886298 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5406673 
End bp5407443 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content65% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003513819 
Protein GI291302541 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.496626 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCCGT TGCTATTGGG CCTGCTCATC GTCGTCGGAG CCAGCATCCT CGCCGGTGGC 
GTCGTGATGC TCCAGCAACG GTTCTCACCA CCCCAGGACC GCGAGGGCTA CAACGAGGTC
GCCGGCAGCG TCTTCGAGAT CATCAGCGTC CTGTACGCGA TCGTGTTGGC CTTCGTCCTG
ATCGCGGTGT GGGAACAGCG TTCCGAGGCC CGCGAGGTCA CCTACGACGA GTCCAACGCC
CTTGTGGACG TGTACTGGGC GTCCAAGGAC CTGCCGAAGG AACAGTCGGG CAACCTCCAG
AACCTGTGCC TCGACTACGC CAACTGGGTC GTCGACGACG AATGGCCCAA AATGGCCGAT
CGCGAGGACG TCGACGACGG CGGCTGGAAG ATCATCGACG CGATGTACTC CGAGATCGAC
GCCGGGATCC CCAAGAAGGA CGAGACCAGC ATCGGCCTCA GCCAGGGCGC CGAGGAGGCC
CTCGCCTCCC TCAGTCAGGC CCGTAACGAA CGTCTCAACG CCAACGACGA AGGCCTGACC
GGCGTCATGT GGCTGGTCCT GGTCGCCGGG GCGCTGCTCA TCTTCGGCAT CCTGCTCCTG
TTCGGGGTGC CCGGCCGCCT GGCACACGTG GTGGTGGTCG TCATCGCCGC CGCCATGGTC
GTGCTGCTGC TGTTCTCGGT CTTCGAACTG GAGTACCCGT TCAGCCGGGG CATCGCGCTG
GGCACCGAGC CCTTCGATCT GGCTCTCGAG CGTATGAAGG CCGTGGGCTA A
 
Protein sequence
MNPLLLGLLI VVGASILAGG VVMLQQRFSP PQDREGYNEV AGSVFEIISV LYAIVLAFVL 
IAVWEQRSEA REVTYDESNA LVDVYWASKD LPKEQSGNLQ NLCLDYANWV VDDEWPKMAD
REDVDDGGWK IIDAMYSEID AGIPKKDETS IGLSQGAEEA LASLSQARNE RLNANDEGLT
GVMWLVLVAG ALLIFGILLL FGVPGRLAHV VVVVIAAAMV VLLLFSVFEL EYPFSRGIAL
GTEPFDLALE RMKAVG