Gene Snas_5084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5084 
Symbol 
ID8886291 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5400307 
End bp5401215 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content68% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003513813 
Protein GI291302535 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCAT CACGCCTAAA GAAAAGCACG ACCGTTCGTT TGTTTCAGTT GACTCGACTC 
GGCTTCCGGA TCGGCGAAAC CATCGCCCCC GGCATCGCGT CCCGGGTCTC GACGCACCTG
TGGTTCCGGT TGCCCGCCAG CGAATCCCGA CGCCGACGCT CCCGGGTTCC GGCTTCGGCC
AACCGTTTCG AACTCGACTC CGAGGGCACC ACGGTGCGCG GCTGGGACTG GGGCTCGGGC
CCGCTGGTCT ACGTGCAACA CGGCTGGGGC GGCTGCGTCG GTGACTTCGA CACCATCGCC
AGTTGCCTGG TCGCCAACGG ATACCGCGTG ATCGCGGTGG ACGGACCCAG CCACGGCCAC
TCCGGCAACG GCCCCTACGG CCCCCGGGCC TCGTCACCGT TGCAACTGGC CAACGCGCTC
GGCGCCGCCA TCGACAAGTT CGGGCAACCG CACGCGGTCG TCGCCCACTC GCTGGGCTGC
CTGGCCGCCG TGCTCGAACT GCGCGAACGG GCCATACCGA AGCGAATGGT GATGATCTCA
CCGTTCATCG GCGGTCCGAC GTTCATGAAG ATGTTCGCCG GCTGGCTGGG GGTCGGGCCG
CGCACCTTCG CCCGGATGGT GGCCTCGGCG GAGGCGCGAA TCGGCAGGCC GATGAGTGAC
TTCAGCATCC CGGATCCGGC GCTGGACGTG GACACTCTGA TCGTCCACGA TCGACGGGAC
CGCTCGACGC CGTTCCAACA CGGCGAGGCC ATCGCGGACG CCTGGCCGAA CGCGCGGCTG
GTCGCCACGG AAGGCTTGGG ACACATGCGA CTCCTGCGCA GCCCGACGGT CGCCGGGGAA
GTCGTGGCGT TCGTGACTGG ACGGTCAGCG CAGCAGGGTG AGCCCGTCCT TGGCGCTGAG
CTGGCCTAG
 
Protein sequence
MSASRLKKST TVRLFQLTRL GFRIGETIAP GIASRVSTHL WFRLPASESR RRRSRVPASA 
NRFELDSEGT TVRGWDWGSG PLVYVQHGWG GCVGDFDTIA SCLVANGYRV IAVDGPSHGH
SGNGPYGPRA SSPLQLANAL GAAIDKFGQP HAVVAHSLGC LAAVLELRER AIPKRMVMIS
PFIGGPTFMK MFAGWLGVGP RTFARMVASA EARIGRPMSD FSIPDPALDV DTLIVHDRRD
RSTPFQHGEA IADAWPNARL VATEGLGHMR LLRSPTVAGE VVAFVTGRSA QQGEPVLGAE
LA