| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_5038 |
|---|
| Symbol | |
|---|
| ID | 8886245 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | - |
|---|
| Start bp | 5347450 |
|---|
| End bp | 5348844 |
|---|
| Gene Length | 1395 bp |
|---|
| Protein Length | 464 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | phospho-2-dehydro-3-deoxyheptonate aldolase |
|---|
| Protein accession | YP_003513768 |
|---|
| Protein GI | 291302490 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.332625 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.389719 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCATCG ATTGGCATCA ACTGCGCAAT CCCGGACTCG TCCCCGGGAG TCTCGACCCC
GCCGCGGCCG TTGAGAGGGC CGCCCAACTC GGCCTCGACC GCTGGCGCGA TCTGCCCCGC
GACCAGATGC CCCCGTGGGA GGACTACTCC GAGGTCGAGG ACGTCTACGG CGTCCTGAAA
TCGGTTCCCC CGATCGTGGC GCCCTACGAG GTGGACGCGC TGCGCGACCA GCTCGCGCAG
GTGTGCGCCG GGAAGGCGTT CCTGTTGCAG GGCGGCGACT GCGCCGAGAC CTTCATCGAC
AACACCGAGG CCCACCTGCT GGGCCTGGCC CGCACCATCC TGCAGATGGC GGTCGTGCTG
ACGTACGGCG CCAGCATGCC GGTGGTCAAG GTGGGCCGGG TCGCCGGTCA GTACACCAAA
CCCCGCTCCA GCGCGACCGA CTCGCTGGGG CTGCCCAGCT ACCGCGGCGA CATGATCAAC
TCGCTGGAGA AGACCCCCGA GGCCCGCCGG GCCGACCCGC AGCGCATGAT CCGCGCCTAC
GCCAACGCGG CGGCGGCCAT GAACATGCTG CGCGCCTACC TGTCGGGCGG CATCGCCGAC
CTGCGGGCGG TGCACCACTG GAACAAGGAC TTCGTCCGGC AGTCCCCGGC CGGGGAACGC
TACGAGGCCA TCGGCCGCGA GATCGACCGG GCGCTGGCGT TCATGGACGC CTGCGGCGTC
GACGACGACG CCCTGCACAC CGTCACGATG TACGCCAGCC ACGAGGCACT GGCGCTGGAG
TACGACCGGG CGCTGACCCG CGTCAACAAC GACCGGGCCT TCGGGCTGTC GGGCCACTTC
CTGTGGGTCG GCGAACGGAC CCGCCGCCTC GACGGGGCCC ACATCGACTT CATCTCCCGG
CTGGCCAACC CGATCGGCGT CAAGATCGGC CCGTCCACGT CGCCGGACTG GGCGCTGGAA
GCCTGCGAGA AGCTCAACCC GGACAACATC CCCGGCAAGC TGACCCTGAT CTCCCGCATG
GGAAACCAGA AGATCCGCGA CGTGCTGCCC ACGATCGTGG CGAAGGTGCA CGCCGCCGGA
CGGCAGGTCA TCTGGCAGTG CGACCCGATG CACGGCAACA CCCACGAATC GTCCAACGGC
TACAAGACCC GCGACTTCGA CCGGGTCGTG GACGAGGTGC TGGGCTTCTT CGAGGTGCAC
CGCTCCACCG GCACCCACCC CGGCGGTATC CACATCGAAC TGACCGGTGA GGACGTGACC
GAGTGCGTCG GCGGCGCCCA GGCCCTGGAC GACAAGGACC TGGAGCAGCG CTACGAGACC
GCCTGTGACC CCAGGCTCAA CACCCAGCAG TCGCTGGAGC TGGCGTTCCT GGTCGCGGAG
ATGCTGCGGC ACTGA
|
|---|
| Protein sequence | MTIDWHQLRN PGLVPGSLDP AAAVERAAQL GLDRWRDLPR DQMPPWEDYS EVEDVYGVLK
SVPPIVAPYE VDALRDQLAQ VCAGKAFLLQ GGDCAETFID NTEAHLLGLA RTILQMAVVL
TYGASMPVVK VGRVAGQYTK PRSSATDSLG LPSYRGDMIN SLEKTPEARR ADPQRMIRAY
ANAAAAMNML RAYLSGGIAD LRAVHHWNKD FVRQSPAGER YEAIGREIDR ALAFMDACGV
DDDALHTVTM YASHEALALE YDRALTRVNN DRAFGLSGHF LWVGERTRRL DGAHIDFISR
LANPIGVKIG PSTSPDWALE ACEKLNPDNI PGKLTLISRM GNQKIRDVLP TIVAKVHAAG
RQVIWQCDPM HGNTHESSNG YKTRDFDRVV DEVLGFFEVH RSTGTHPGGI HIELTGEDVT
ECVGGAQALD DKDLEQRYET ACDPRLNTQQ SLELAFLVAE MLRH
|
|---|
| |