| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_5017 |
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| Symbol | |
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| ID | 8886224 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | - |
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| Start bp | 5324329 |
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| End bp | 5325783 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | |
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| Product | glycoside hydrolase family 30 |
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| Protein accession | YP_003513747 |
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| Protein GI | 291302469 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000784671 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.283576 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTCGTT TTGAGCTTCG GCGTGCGCAG GTGCTGACCG CCGTGTCGGT CCTCGGGCTG
GTGATGCTGG TCGTTCCGGG CAGCGCGCCG GTGTCCGGTC CGCGGGTGGA CGTGTGGCTG
ACGACGACGT CAGACGCGGA CGGCCGGGTC GTCGACAAGG GACTGGAGCC GCAGCCGTCG
ACGCGGTTCG GCGAGAGCGA TCCCGCTGCC GGGCAACTGA TCGAGGTCGA CCAGGGCACC
ACGTACCAGG AGTTCGAGGG TGGCGGAGCG TCCTTCACCG ACACCGCCGC GTGGCTGATG
CGCGGCAGCG GCGCGCTCGA CGAGGCCGAC CGCGACAAGG TCATGGAGAA GCTGTTCGAC
CGTCGCGAGG GGATCGGGCT GGGATTCCTC CGCAATCCCA TGGGCGCCAG CGATCTGGCG
CGCTACGCCT ACTCCTACGA CCGCACCTGT TGCGACCTGT CGGACTTCTC GATGGACAAG
GACGCCGACG TCATGGCGTT GACGAAGCAG GCAGCCTCCA TCAATCCCGG GATCACGGTC
AAGGCGGTGC CGTGGAGTTC ACCGGCCTGG ATGAAGGACA ACAACGACAT CGAGCACCGT
GGCTGGCTGC GCCACGAGTA CTACGACGAG TACGCGCAGT ACTTCGTCAA GTACATCCAG
GCCTATGCCA AGGCTGGTGT CGACATCGAC TACGTCTCGC CGCAGAACGA GCCCGGCTGC
TGTTACGGCA CCGACTATCC GTCCATGAAC TGGAACGCCG ATGCCTTGCG GGCGTTCACC
AAGGACCACC TGTGGCCCGC GTTCCGTAAG GCGGGCATCG ACACCAAGAC GCTGGTGTTC
GACTGGAACT GGAAGAACTT TCCCGAGATG GGTGCCGAGC AGCTGGCCGA CGCCGAACTG
GTCGACGATC CGCTGTTCGG TGGGATCGCC TGGCACGGAT ACGCGGGCGA TCCCTCGACG
CAAAGCGAGG TCCACAAGCA ATACCCGGGC GTGAAGTCGT TCAACACCGA GAACTCCGGC
GGTGGCTGGG TGGACGACCA GCAGCGCGAG GACATGCTCA ACCTGATCGA CTACACCCGC
AACTGGGGAC GCAGCTGGGT CAAGTGGAGC CTGGCGATGG ACCAGAACAA CGGTCCCACC
AGCGGCGGCT GCGGTACCTG CACCGGACTC ATCACCGTCC ACAACGGCGG CAAGCGACAC
GGGCAGGTCG ACTACACGGT CGAGTACTAC ACGATGGGGC ACCTCACCAA GTTCGTCGAA
CCCGGCGCGG TGCGCGTCGC CTCCACCGAC GGTGCGGTCC GCAACGTCGC CTGGCGCAAC
CCCGACGGCT CCACGGCGCT GATCGCCTAC AACGACACCG ACAAGCCGCG AACGATCCGG
ATCAAGGCTG ACGGCCACTA CGCGTCCTAC CGGCTGCCCG CCCGCGCGTC GGCGACGTTC
ACCTGGGGCG GCTGA
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| Protein sequence | MPRFELRRAQ VLTAVSVLGL VMLVVPGSAP VSGPRVDVWL TTTSDADGRV VDKGLEPQPS
TRFGESDPAA GQLIEVDQGT TYQEFEGGGA SFTDTAAWLM RGSGALDEAD RDKVMEKLFD
RREGIGLGFL RNPMGASDLA RYAYSYDRTC CDLSDFSMDK DADVMALTKQ AASINPGITV
KAVPWSSPAW MKDNNDIEHR GWLRHEYYDE YAQYFVKYIQ AYAKAGVDID YVSPQNEPGC
CYGTDYPSMN WNADALRAFT KDHLWPAFRK AGIDTKTLVF DWNWKNFPEM GAEQLADAEL
VDDPLFGGIA WHGYAGDPST QSEVHKQYPG VKSFNTENSG GGWVDDQQRE DMLNLIDYTR
NWGRSWVKWS LAMDQNNGPT SGGCGTCTGL ITVHNGGKRH GQVDYTVEYY TMGHLTKFVE
PGAVRVASTD GAVRNVAWRN PDGSTALIAY NDTDKPRTIR IKADGHYASY RLPARASATF
TWGG
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