Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_4998 |
Symbol | |
ID | 8886205 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 5304418 |
End bp | 5305014 |
Gene Length | 597 bp |
Protein Length | 198 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | 3-isopropylmalate dehydratase small subunit |
Protein accession | YP_003513728 |
Protein GI | 291302450 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.590401 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGAGCT TCACCGTCCA TACCGGCCGC GCCCTGCCGC TGCGCCGCTC CAACGTGGAT ACCGACCAGA TCATCCCGGC CAGTTACCTC AAGCGGGTGA CGCGCACCGG CTTCGCCGAC GGCCTGTTCG CCTCGTGGCG TGGCGATCCC GATTTCGTTC TCAATCGGGA TGCATATGCG GAATCCACCA TCCTGGTGAC GGGAACCGAA TTCGGCACCG GATCCTCGCG GGAACACGCC GTGTGGGCGT TGCAGGACCA CGGTTTCCGC GCGGTCATCG CGCCTCGTTT CGGCGACATC TTCCGCGGCA ACGCCCTCAA GGGAGGGCTG TTGCCTGTCG AGTTGGACAC ATCCGCCGTC GAATGGCTGT GGGACGCCGT CGAGGCGGAC CCCTCCATAG AGGTCACGGT CGATCTGGAG CGCCGGGAAG TCATTGCCGG GCAACAGGTA TGGAAATTCG ACCTCGACGA TCACAGTCGG TGGCGATTGC TGGAGGGATT GGACGACATA GATCTGACGC TTCGGGACGA ATCGGCCATC ACGGCCTTCG AATCCGAACG TCCGTTGTGG CTTCCACGGA CACTGCCGGT GGCGTGA
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Protein sequence | MQSFTVHTGR ALPLRRSNVD TDQIIPASYL KRVTRTGFAD GLFASWRGDP DFVLNRDAYA ESTILVTGTE FGTGSSREHA VWALQDHGFR AVIAPRFGDI FRGNALKGGL LPVELDTSAV EWLWDAVEAD PSIEVTVDLE RREVIAGQQV WKFDLDDHSR WRLLEGLDDI DLTLRDESAI TAFESERPLW LPRTLPVA
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