Gene Snas_4998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4998 
Symbol 
ID8886205 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5304418 
End bp5305014 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content63% 
IMG OID 
Product3-isopropylmalate dehydratase small subunit 
Protein accessionYP_003513728 
Protein GI291302450 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.590401 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAGCT TCACCGTCCA TACCGGCCGC GCCCTGCCGC TGCGCCGCTC CAACGTGGAT 
ACCGACCAGA TCATCCCGGC CAGTTACCTC AAGCGGGTGA CGCGCACCGG CTTCGCCGAC
GGCCTGTTCG CCTCGTGGCG TGGCGATCCC GATTTCGTTC TCAATCGGGA TGCATATGCG
GAATCCACCA TCCTGGTGAC GGGAACCGAA TTCGGCACCG GATCCTCGCG GGAACACGCC
GTGTGGGCGT TGCAGGACCA CGGTTTCCGC GCGGTCATCG CGCCTCGTTT CGGCGACATC
TTCCGCGGCA ACGCCCTCAA GGGAGGGCTG TTGCCTGTCG AGTTGGACAC ATCCGCCGTC
GAATGGCTGT GGGACGCCGT CGAGGCGGAC CCCTCCATAG AGGTCACGGT CGATCTGGAG
CGCCGGGAAG TCATTGCCGG GCAACAGGTA TGGAAATTCG ACCTCGACGA TCACAGTCGG
TGGCGATTGC TGGAGGGATT GGACGACATA GATCTGACGC TTCGGGACGA ATCGGCCATC
ACGGCCTTCG AATCCGAACG TCCGTTGTGG CTTCCACGGA CACTGCCGGT GGCGTGA
 
Protein sequence
MQSFTVHTGR ALPLRRSNVD TDQIIPASYL KRVTRTGFAD GLFASWRGDP DFVLNRDAYA 
ESTILVTGTE FGTGSSREHA VWALQDHGFR AVIAPRFGDI FRGNALKGGL LPVELDTSAV
EWLWDAVEAD PSIEVTVDLE RREVIAGQQV WKFDLDDHSR WRLLEGLDDI DLTLRDESAI
TAFESERPLW LPRTLPVA