Gene Snas_4996 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4996 
Symbol 
ID8886203 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5302535 
End bp5303611 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content65% 
IMG OID 
Productphospho-N-acetylmuramoyl-pentapeptide- transferase 
Protein accessionYP_003513726 
Protein GI291302448 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.337659 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTCATCG GCGCCATCGT TGCCTTCGTC ATCTCCATCT TCATCACCCC GTTCGCGATC 
AAGCTGTTGC GCCGCTGGCA ACAGCCGGTG CGCAACGAGC TCGGTCTGGC CAGCAACGAG
GGCAAGCAGC GAACCCCGAC GATGGGCGGG ATCGTCTTCG TCTGCGCCAC CGTCATCGCC
TACGCGGTAG GGCATGTGTC GCTGCTGCCG CTACAGGGAC GACCGCACCT GCCGACCGTC
ACCGGGCTCA TGTTGCTGGG ACTGTTGGTG GGCGGCGCGT TCATCGGACT GCTGGACGAC
ATCCTGAAGG TGGTGAAGCG GCACCCGGGC GGGCTGGCCG GGCGGTACAA GATCCTCGGA
CAGATCGTCG TCGGTGCCGG ATTCGGCGCG ATGGCGCTGT ACCTGCCGAG CCCCGAAGGC
TACACAGTGG GCACCGGACA TCTTTCACTC GTACGAGACC TTCCGTGGGC CAACATCACC
GAGATCGGCG CGCTCGTCGT CTTCGTACTC GTCGTCATGG CGGCATCGAA CAGCGTCAAT
CTCACCGACG GGCTGGACGG ACTGGCGGCG GGATCGACGG CCATCGTGAT GGCGGCCTAT
GTGGTCATCG CGTTCTGGCA GTACCGGCAC TGGTGCGCCG AGGTCCCGAA ACTGGGGCCC
TGCTACGAGG TCCGCGATCC GCTGGAGGTG GCGCTGGTCG CCGGTGCCGC GGCCGGGGCG
CTCGTCGGAT TCCTGTGGTG GAACACGTCT CCGGCCAAAA TCATCATGGG CGACGTCGGC
TCGCTGGGGC TCGGCTGCCT GATCGCGGGA ATGGCGATGG CCACCCGCAC ACTGCTGTTG
CTGCCCGTGG TGTGTGGACT GTTCGTCTTC GTGACTTCGT CCCGGATCAT CCAGTATGTC
TCCTTTAAGA CCACTGGAAA GCGCGTATTC CGTATGTCCC CCATACATCA CCATTTCGAG
ATGGCCGGAT GGAGCGAGGT CACCATCGTG ACCAGGTTCT GGCTGCTGGC CGCGATCTCG
GCCTCGCTGG CCATCGGGGT GTTCTTCGCG GAATTCCTGC GCGCCGCGGG CGGATAA
 
Protein sequence
MLIGAIVAFV ISIFITPFAI KLLRRWQQPV RNELGLASNE GKQRTPTMGG IVFVCATVIA 
YAVGHVSLLP LQGRPHLPTV TGLMLLGLLV GGAFIGLLDD ILKVVKRHPG GLAGRYKILG
QIVVGAGFGA MALYLPSPEG YTVGTGHLSL VRDLPWANIT EIGALVVFVL VVMAASNSVN
LTDGLDGLAA GSTAIVMAAY VVIAFWQYRH WCAEVPKLGP CYEVRDPLEV ALVAGAAAGA
LVGFLWWNTS PAKIIMGDVG SLGLGCLIAG MAMATRTLLL LPVVCGLFVF VTSSRIIQYV
SFKTTGKRVF RMSPIHHHFE MAGWSEVTIV TRFWLLAAIS ASLAIGVFFA EFLRAAGG