Gene Snas_4992 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4992 
Symbol 
ID8886199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5298931 
End bp5300529 
Gene Length1599 bp 
Protein Length532 aa 
Translation table11 
GC content67% 
IMG OID 
Productdrug resistance transporter, EmrB/QacA subfamily 
Protein accessionYP_003513722 
Protein GI291302444 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.357314 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCCAGC AGGCTTCCCC GACGCTGCCC GAGACCGGGC ACCCCCGTCG CTGGTTCATC 
TTGAGCGCTC TGGTGCTCAG CCTCATCGTC GTCGTCCTGG ACAACACCGT CCTGAACGTG
GCGATGAAGG TCATCGCCGA CCCGAAGGAA GGCCTGGGCG CCAACCAGGC CGAACTGGAA
TGGTCCATCA ACTCCTACAC CCTTGTCTTC GCCGGTCTGC TGTTCACGTT CGGTGTGATC
GGCGACCGCA TCGGCCGCAA GCGGATGCTG CTGGCCGGTC TGGTGCTGTT CGGTCTGACG
TCGGTGGCCT CGGCCTTCGC CCAGAATCCG GAGCAGCTGA TCTGGGCCCG TGCCGGTATG
GGCATCGGCG CCGCGGCCAT CATGCCCGCG ACTTTGTCCA TTTTGACCAA TGTGTTCGCG
CCGAAGGACC GGGGCCGCGC CATCGGCATC TGGTCCGGCG CGGTCGGCAT CGGCATCGCC
ATCGGCCCGA TCATCGGCGG CGCGCTGCTG GAACAGTTCT GGTGGGGCTC GGTGTTCCTC
ATCAACGCGC CGGTCGTGAT CATCGCGCTG CTGGCCATCG GATTCGTCGC CCCCGAATCC
CGCAACCCCA ACAAGGTCCC GCTGGACTTC GGCGGCGTGA TCCTGTCCAT CCTGGGTCTG
GTCTCGCTGA CCTACGGCAT CATCGAGGGC GGCGAAACCG GTGACTGGGG CCAGATCGGC
GTGTGGGGAC CGACCGCGTT CGGCGTCGTC GTCCTGGCCG CGTTCGTGCT GTACGAGCGC
AGGATCGCGC ACCCGGCCCT GGACGTGCGG CTGTTCAAGG AGCGGCGTTT CGCCAGCGCC
TCGGCGGTCA TCTCGCTGCT GTTCTTCGCC GCCATGGGCC TGATGTTCTT CATGACCTTC
TACATCCAGA TCATCAAGGG GCTCAGCCCG TTGGAGACCG GTCTGATGTT CCTGCCGTTC
GCCGGTGCCA TGCTGATCTT CTCGCCGCTC AGCGCCGGAA TGGTGAAGCG CTTCGGCCCC
AAGGTCGTGG CTACCGCCGG GATGACGGCC ATCACCGCCG CCTTCGCCGG GTACATACTG
CTGGACGCCG ACACGCCGCT GTGGGTCATG GCCGTCATGT TCTTCGTGCA GGGCTCCGGG
ATGGCCAACG TGATGCCGCC GGCCATGGAC ACCATCATGG GTTCGGTGCC GCGCGAGAAG
TCCGGTGTCG GTTCGGCCGT GGGCAACACG TTGCGGCAGG TCGGCGGTTC GCTGGGCGTC
GCGGTGCTGG GATCGGTGCT GTCGCAGTTG TACCGCGACG ACATCAGCGG CAAGATCCCG
GCCGGTCTGG AGACCGGCGA CGTGGACCCG GCCGAGTCGA TCGCCTCGAC CTACGGTGTC
GCCCAGCAGA TGGGGCCCGC GGGCCGCGAG CTGATGAACT CCGCGACCGA CTCGTTCATC
GCGGCCATGC ACACGACCGC TATCGTGTCG GCACTCGTCG GACTGGCCGG CATCATCGTG
GCGGTCACCC TGTTCCCACG GCGCAACGCC ACCCCCGCCG CGCCGCAGCA GCGGGAGTCC
GACGACAAGG CGCCGCAACC GGCGCTCGTG GACGCGTAA
 
Protein sequence
MPQQASPTLP ETGHPRRWFI LSALVLSLIV VVLDNTVLNV AMKVIADPKE GLGANQAELE 
WSINSYTLVF AGLLFTFGVI GDRIGRKRML LAGLVLFGLT SVASAFAQNP EQLIWARAGM
GIGAAAIMPA TLSILTNVFA PKDRGRAIGI WSGAVGIGIA IGPIIGGALL EQFWWGSVFL
INAPVVIIAL LAIGFVAPES RNPNKVPLDF GGVILSILGL VSLTYGIIEG GETGDWGQIG
VWGPTAFGVV VLAAFVLYER RIAHPALDVR LFKERRFASA SAVISLLFFA AMGLMFFMTF
YIQIIKGLSP LETGLMFLPF AGAMLIFSPL SAGMVKRFGP KVVATAGMTA ITAAFAGYIL
LDADTPLWVM AVMFFVQGSG MANVMPPAMD TIMGSVPREK SGVGSAVGNT LRQVGGSLGV
AVLGSVLSQL YRDDISGKIP AGLETGDVDP AESIASTYGV AQQMGPAGRE LMNSATDSFI
AAMHTTAIVS ALVGLAGIIV AVTLFPRRNA TPAAPQQRES DDKAPQPALV DA