Gene Snas_4990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4990 
Symbol 
ID8886197 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5297635 
End bp5298408 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content68% 
IMG OID 
Productphospholipid/glycerol acyltransferase 
Protein accessionYP_003513720 
Protein GI291302442 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.300338 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.19338 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCAGAA GCAAAGACAA GCTCGACGCC AAGTACTGGT TCGGCCGCCC CGGCGGTGAC 
CGGCGCGGCT TCTGGCTGCT CGTCGTCGCA CAGCCCATCA AGTGGTTCCT GTGGTTCATC
GCCAGCCGGA CCTGGTCCGG GATGCGGCAC GTGCCCATGA AGGGCGGGGT GATCCTCGCC
TGCAACCACA TCTCGCAGGC CGACCCGCTC GTGGTGGCGC ACTTCGTCTA CAACACCGGC
CGCAACCCGT CGTTCCTGGC CAAGGACGGT GTCTTCAAGG TGCCGGTGGT CGGCAAGCTC
ATCAAGTGGA CCGGCCAGAT CCCCGTCTAC CGGGGCGGCA CCGACGCCGT CAAGTCGCTG
CACGCCGCCA TCGAGCGCGT CGACAGCGGC GGCTCGGTGA TCTTCTACCC CGAGGGCACC
ACCTCCAAGC AGCCCGAGCA CTGGCCGATG CGCGGCCGCA CCGGAGTCGC CCGGCTGGCA
ATGGAAACCG GCGCCCCGGT CATCCCGATG ACCGTGTGGG GGCCGCAGCG TATCTTCGAC
CCCATTCGCA AGAAGGCGCG GTTCCGGTTG CGCGCACCCG TCACCGTCAC CGCCGGTCCG
CCGGTGGACC TGTCGGCCTG GGAAGGGGCC GAACCCAACG CCGAGAACCT CAACGCGATG
ACCGATGCGA TCATGTTGCG CATCCGTGAT CAGCTCGCCG AGCTGCGCGG CGAGGCCGCG
CCACCCCTGT ACGACCTCAA GGCGGCCAAG AAGAAGAGCA GGGAGGAAAC CTGA
 
Protein sequence
MPRSKDKLDA KYWFGRPGGD RRGFWLLVVA QPIKWFLWFI ASRTWSGMRH VPMKGGVILA 
CNHISQADPL VVAHFVYNTG RNPSFLAKDG VFKVPVVGKL IKWTGQIPVY RGGTDAVKSL
HAAIERVDSG GSVIFYPEGT TSKQPEHWPM RGRTGVARLA METGAPVIPM TVWGPQRIFD
PIRKKARFRL RAPVTVTAGP PVDLSAWEGA EPNAENLNAM TDAIMLRIRD QLAELRGEAA
PPLYDLKAAK KKSREET