Gene Snas_4978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4978 
Symbol 
ID8886185 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5287640 
End bp5288806 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content69% 
IMG OID 
ProductMicrosomal epoxide hydrolase 
Protein accessionYP_003513709 
Protein GI291302431 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0459934 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGTTC ACCCCTTTCG CATCGACATT CCCCAGTCCG AGATCGACGA CCTGGCCTCC 
CGGCTCGATC GCACCCGGTG GCCCGAGGCC AACCCGTCGG GCATCGGCTG GGACCGCGGC
GTGCCACCCG AGTACCTCAA GGGCCTGGTC GACCACTGGC GCAAGGAATA CGACTGGCGC
GCCGCCGAGT CCCGGCTCAA CGCCTTCCCG CAGTTCCGCA CCGAGATCGA CGGCCAGACC
ATCCACTTCC TGCACATCCG CTCCGCCGAG GCCGACGCCA CCCCGCTGCT GCTGACCCAC
GGCTGGCCGT CGTCCTTCGT GGAGTTCACC GGGATCGTCG GCCCGCTCAC CGACCCCCGC
GCCCACGGCG CCGACCCCGC CGACGCGTTC CACCTGGTGA TCCCGTCGCT GCCGGGCTTC
GGGTTCTCCA ACCCGATGTC GCGGCCCGGC TGGGGCAACC TGTTCCAGGT CGCCTCGGCG
TGGAAGCAGC TGATGGAACG GCTGGGCTAC GACCGCTACG CCGCCCACGG CAGCGACGCC
GGAGCCGGGG TCACGACCAT GCTGTCCATG CTGGACGCCG AACACCTGAT CGCCGGACAC
GTCGCCGGAC CGGCGCCGTT CCCCTTCGGA CCCCCGATCG ACACCGCCGG GCTCAGCGGC
GGCGACCTCG ATCGCGCCGA GCGCTTCAAC GAGTTCCAGC AGGACGGAAC CGGCTACCTG
CGGATCCAGG CCACCCGGCC GCAGACACTC GGCTACTCGC TCAACGACTC CCCGGTCGGG
CAGCTGGCCT GGATCGCGGA GAAGTTCGCC GAATGGACCG ACCCGGCGAC CGAACTACCC
GACGAGGCCG TCGACCGCGA ACAGCTGCTG ACCCTGGTCA GTCTGTACTG GTTCACCCAG
TCGGGAGCCA GCTCGGCCCA CTTCACCTAC GACGGCATGC GGGGATACGC CCAGATGGCG
CAGCACTCCG ACACCGACGC TCCGCCCCCG TCCGGCGCGC CGACCGGCGT CGCCGTGTTC
GCCGCTGACC ACAGTATACG GTCAATAGTG GACCCGGCCG GGTCGATGGC CTCGTGGACC
GAATATCCCC ACGGCGGGCA TTTCCCCGCC ATGGAGGTCC CCGGACTGCT GACCGAGGAG
CTGCGAAACT TCTTCCGCAA GTGGTGA
 
Protein sequence
MSVHPFRIDI PQSEIDDLAS RLDRTRWPEA NPSGIGWDRG VPPEYLKGLV DHWRKEYDWR 
AAESRLNAFP QFRTEIDGQT IHFLHIRSAE ADATPLLLTH GWPSSFVEFT GIVGPLTDPR
AHGADPADAF HLVIPSLPGF GFSNPMSRPG WGNLFQVASA WKQLMERLGY DRYAAHGSDA
GAGVTTMLSM LDAEHLIAGH VAGPAPFPFG PPIDTAGLSG GDLDRAERFN EFQQDGTGYL
RIQATRPQTL GYSLNDSPVG QLAWIAEKFA EWTDPATELP DEAVDREQLL TLVSLYWFTQ
SGASSAHFTY DGMRGYAQMA QHSDTDAPPP SGAPTGVAVF AADHSIRSIV DPAGSMASWT
EYPHGGHFPA MEVPGLLTEE LRNFFRKW