Gene Snas_4971 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4971 
Symbol 
ID8886178 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5282619 
End bp5283728 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content69% 
IMG OID 
ProductFAD-dependent pyridine nucleotide-disulfide oxidoreductase 
Protein accessionYP_003513702 
Protein GI291302424 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.463059 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0632249 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCGA CCGTAGCCGT CGTCGGGGGA GGCTATGGCG GGATCACCGT CGCCCAGGCG 
CTGGACGACG TCGCCGACGT CGTCCTCATT GACCCCAAGG ACGCGTTCGT ACACAATGTC
GCCGCGCTGC GCGCGATCGT GGATCCATCG TGGGCGGAGC AGATGTTCAT GCCCTACTCG
GGGCTGCTGA AGCGCGGGCG GGTTGTCGAG GACTGGGTGG TCTCGGTTGA GGCGCACGGG
GTGTGGCTGT CGTCGGGTGG GTTCATGCAG GCCGACTACA TCGTGATCGC CACCGGTACG
AGTTACCCGT TTCCGGCCAA GGTCGGTTCG CACCACGCGG AGGCGGCCCG GCGGCGGATC
CAGGCGACCT CGGAGGCGCT GTACCAGGCG GGGCACGTGC TGCTGCTGGG CGCCGGTCCG
GTGGGGCTGG AGCTGGCCGG TGAGATCTCG TCCGCGTGGC CGCAGAAGGG CGTCACCGTC
GTGGATCCGG CCGGGGAGAT CCTGTCGGGC ACGTTCATGG CCGACTTCGA TCCCGAGCTG
AGCCAGCGGA TGCGCGACAT GCTGCACCAG CAGTTGATGG AGCGCGGCAC CCGGCTGCTC
CTGGGCACGG CCCCCGATCA CAGCCTGCCG GTCCCGGCGG GGACGTTGCA GACCTTCACC
ACGACGATGC GGTCCGGTGA GACGGTCACC GCCGACATCT GGTTTCGGTG CCACGGACGG
CAACCGGCCT CGCGGGTGCT GGGGCGGAGC CTGTCCATGG TGCGCCGCCA CGACGACCTG
ATCGAGGTCA TGCCGGACCT GCGGTTGCGG GGGCAGCGGC GGGTGTTCGC CATCGGCGAT
GTCACCGCCA CCGGCGCCCT GGACACGGCG GTGGTGGCCA TCGAGCAGGC GGGAGTGGTG
GCCGACAACA TCCGGTTCCT GTTGACGGGT GAGGGTGAAC TGGGGACGTA TCGGCCCGCG
CAGCCGGTCC TGTCGATTCC GTTGGGCCCC ACCGGCGGCG TGACGTACAT ACCCGACGCC
GGGATCCTGG ACGGCGACGC CACGGCCGAG ATCAAGGGCG GTGACCTGTT CGTCGGGCGT
TACGCGGCGA TGTTCGGGTT GTCCGGCTGA
 
Protein sequence
MTATVAVVGG GYGGITVAQA LDDVADVVLI DPKDAFVHNV AALRAIVDPS WAEQMFMPYS 
GLLKRGRVVE DWVVSVEAHG VWLSSGGFMQ ADYIVIATGT SYPFPAKVGS HHAEAARRRI
QATSEALYQA GHVLLLGAGP VGLELAGEIS SAWPQKGVTV VDPAGEILSG TFMADFDPEL
SQRMRDMLHQ QLMERGTRLL LGTAPDHSLP VPAGTLQTFT TTMRSGETVT ADIWFRCHGR
QPASRVLGRS LSMVRRHDDL IEVMPDLRLR GQRRVFAIGD VTATGALDTA VVAIEQAGVV
ADNIRFLLTG EGELGTYRPA QPVLSIPLGP TGGVTYIPDA GILDGDATAE IKGGDLFVGR
YAAMFGLSG