| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_4968 |
|---|
| Symbol | |
|---|
| ID | 8886175 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | - |
|---|
| Start bp | 5279456 |
|---|
| End bp | 5280709 |
|---|
| Gene Length | 1254 bp |
|---|
| Protein Length | 417 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003513699 |
|---|
| Protein GI | 291302421 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.46119 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.176655 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGTGACA ACGTGAGTCG CACGGGGGTA TTTGTGAACG AACGCGCGAA GCCGTTGCGC
GGCATCGACC AGTGTCTGGT CACGTACGAG AAGCGTTGCG GCCGTAGCGT CGGCATCGGG
CTGTTGCTTC GTTTCGACGG CGAGGCGCCG GATCTGAGCC AACTCGTGCG ACACCTCGCC
GAGAGGTTCT CCACGGTCCC GGAACTGCGT TGGCTGCTGG GCGAGTCCCG GGGACGATCG
GTGTGGTACC CGGATCCGCG GTTCAGCTGG GACTCCCGCA TCGCGCAGTA CTCCGGATAC
CGTGCCGATG GCGAGACCGG CCTTCGCGCC GCCGTCGGGG ACATCGCCGC CATGAGGCTC
GATCCCGCGA CAGCGCCGTG GCGGGCATGG CTGCTGCGGG GATTCGCCCC AGGCCAATGG
GCGCTGATGC TGCACGTCCA CCACGCCCTG GCCGATGGCC AGAGCATGAT GAGCCTGGCG
CACCGCGCTT TCGGCGAGCG ATCGTCGCTG TCGCGTCCGT CGCGAAGCTG GATCACCCCG
AGGCGCCTTT CGCGACGCGA ATCCTGGGCC AAGCTCCTGC GCGGCGGCCC CCGACAGGCG
TGGAACCTGG TGCCACGCCG ATTCCCGACC CGAAACGCCA ACGGCGATCA CCGCGTCGAC
TGGGCGACCT TCGACAGCGC ACAGGTGCGG CGGATAGCCG CGCACCACGA CGCGACCGTC
AACGACGTCG TGCTCGCGCT GACGACCCGA ACCCTGTCGA CCGGCGACAC GACCCCGTAC
GCCCTCATAC CGGTCAGCAC CCGCTCGGCC GACGACACCC ACCGACTGGG CAACGAACTG
ACGACGATGC GCGTGCCGCT GCCGAAGCGA CACCAGGATC CGGTCTCGGC ACTCAAGGCC
ATCACCGCCG CGACCACCCA GGCCAAACAC GGTCGCGACA TCGACGTCTC CCGGGCCGGA
GCCGAGGTAC TGCCGAGCTG GGTCTTCGCG TCCCTGTTCC GGCACGCGCT CACCGGCGGC
TATGTGGACA TCATCGTCAG CAACTGGGGA ACCACTCCCG CCCTGGCATT CCACGACAAC
CCCGTACGCG AACTCGTACC CATCATGTTC CGGCCGCCCG GCCACGCCAC CACGATCGGC
TTCGCCACTC ACGGCAACCG CACCCACGTC GGCGTCGTCT CCACAAGCGA CACCGACCGG
CTGCGCGACC ACTGGCACAG CGCACTCACG TCCCTGCACG ACAGTGCCGA GTGA
|
|---|
| Protein sequence | MCDNVSRTGV FVNERAKPLR GIDQCLVTYE KRCGRSVGIG LLLRFDGEAP DLSQLVRHLA
ERFSTVPELR WLLGESRGRS VWYPDPRFSW DSRIAQYSGY RADGETGLRA AVGDIAAMRL
DPATAPWRAW LLRGFAPGQW ALMLHVHHAL ADGQSMMSLA HRAFGERSSL SRPSRSWITP
RRLSRRESWA KLLRGGPRQA WNLVPRRFPT RNANGDHRVD WATFDSAQVR RIAAHHDATV
NDVVLALTTR TLSTGDTTPY ALIPVSTRSA DDTHRLGNEL TTMRVPLPKR HQDPVSALKA
ITAATTQAKH GRDIDVSRAG AEVLPSWVFA SLFRHALTGG YVDIIVSNWG TTPALAFHDN
PVRELVPIMF RPPGHATTIG FATHGNRTHV GVVSTSDTDR LRDHWHSALT SLHDSAE
|
|---|
| |