| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_4959 |
|---|
| Symbol | |
|---|
| ID | 8886166 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | - |
|---|
| Start bp | 5268418 |
|---|
| End bp | 5270184 |
|---|
| Gene Length | 1767 bp |
|---|
| Protein Length | 588 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | phosphonate ABC transporter inner membrane subunit |
|---|
| Protein accession | YP_003513691 |
|---|
| Protein GI | 291302413 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGACAC AACTGGAAGC ACCACCGAAG GCACCCGCGC CCGTACCGAG CAGGCGCACG
TTGGCGCCGT TGCGGCTCAA CACGATCCTG GCCACCATTG TGGTCGGTGT CCTGTTGGTG
TTCGGCCTGT GGTCGCTGAA CTATCTGGGC ATCAACTTCG CCACCCTTGC CGACAGCGTC
AGCAACGGCA TCGAATTCGT CTCCCGGGCC ACCCCGCTGT CCTTCCCGCC GCTGGGGGAG
ACCGCGGTCC TGATCGCACA GACGCTGGCG ATCGTCATCT CGGCGACGCT GCTGTCCATG
GTGCTCAGTG CGCCGCTGGC GTTCTGGGCC GCCGCCAACA CCTCGCCCAA CATCGCCGCC
CGGCTGGGAT CTCGGGGCGT CATCGTCGTG GCCCGCGCCA TCCCCGACAT CGTCCTGGCC
ATCATCTTCG TGCGCATCTT CGGGCTGGGC ATCCTGCCGG GCGTGCTGGC CATGGGCCTG
CACTCCATCG GCATGATCGG CAAGATGTAC GGCGACGCGA TCGAGCAGAT CGACGAGGGG
CCCCGTACCG CGCTGCGGGC GGCGGGCGCC ACCCGTCGAC AGCAGCTCAT CGGCGGCGTG
CTGCCGCAGG TGCTGCCCGC GTTCGTCGCC ACCGCCATGC ACCGCCTCGA CATCAACCTG
CGCATCTCGG TGCTGCTGGG TTACGTCGGC GTCGCGGGCA TCGGCAAGGA GATCAAGGAC
GCCGTCGAAA GCCTCCAGTA CCGGCGCGCG CTGGCGCTGG CACTGATCAT CCTGGTCCTC
ATCATCATCA TGGAGCTGAT CTCCGGCGCC GTGCGCAAGA TGCTGCTGGG TCCCGCCGGG
GCAGAGCCCT CGCGTTTCGG TTTCGTCCGG CTGTTCCGGT GGATCGGGCG CAAGCTGACC
GGCCGCAGGC CGAAGGAGGA GGTCAAGGTC CCCGCGCCGC GGGGCGCCGT GGCCGTGGCT
TCCCAACGCA TCTCACCACC GTGGACGTTC CGGCGGATCC GCCGGTTCAC GTACATGCTG
TTGGGCCTCG CGATCGCGGG AGTCTCGGTG GTCTATGTGG TCGTCGACTT CACCGGGATC
GGCGGTGGCG TCGGCTTCAT CGACACCATG TCGCGACTGT GGCCGCCGGG AACCGGCGGG
GTCGCGATGT CGGAACTGTG GTTCTCGTTG TTCGAGACCT TCGTCATCGC GATGGCCGCC
CTGGTCATAG GCCTGGTGCT CGCGCTGCCG GTCGGCTGCC TGGCCGCGCG CAACGTCGCC
CCCAACTCGG TGATCGCCAA GATCTTCCGG ATCTTCATCG TGTGTGTGCG AGGCGTTCCC
GAACTGGTGC TGGCCATCCT GTTCGTCATC ATCGTCGGAC TGGGAACGGT GGCGGGCGCC
TTCGCCTTGG CCATCGGCGC GATCGGTCTG CTGGGCAAGC TGGTCGCCGA CTCGCTCGAG
GAGGTCGATC CCGGCGTCGA ACAGGCGCTG CGCGCCACCG GTGCCTCGCG GGTGCGGGTG
TTCTTCGCGG CGACACTGCC GCAGGCCCTG CCCGCGTTCA TCGGCCACAT CCTGTACCAG
CTGGACGTCA ACTTCCGCGC CGCCACGATC CTGGGCATCG TCGGCAGCGG TGGTATCGGC
TACTACCTGT TGCAGGCCTC CCGGGTGCGC GAGTTCGAAA CGGTCACGAC GATCACGCTG
ATGATCTTCG GTGTCGTCAT GACCATCGAA CTGATCGCGA TGTGGCTGCG GCGCACCGCC
GGGGCCAAGA GCGGCGGCGC CGCCTGA
|
|---|
| Protein sequence | MSTQLEAPPK APAPVPSRRT LAPLRLNTIL ATIVVGVLLV FGLWSLNYLG INFATLADSV
SNGIEFVSRA TPLSFPPLGE TAVLIAQTLA IVISATLLSM VLSAPLAFWA AANTSPNIAA
RLGSRGVIVV ARAIPDIVLA IIFVRIFGLG ILPGVLAMGL HSIGMIGKMY GDAIEQIDEG
PRTALRAAGA TRRQQLIGGV LPQVLPAFVA TAMHRLDINL RISVLLGYVG VAGIGKEIKD
AVESLQYRRA LALALIILVL IIIMELISGA VRKMLLGPAG AEPSRFGFVR LFRWIGRKLT
GRRPKEEVKV PAPRGAVAVA SQRISPPWTF RRIRRFTYML LGLAIAGVSV VYVVVDFTGI
GGGVGFIDTM SRLWPPGTGG VAMSELWFSL FETFVIAMAA LVIGLVLALP VGCLAARNVA
PNSVIAKIFR IFIVCVRGVP ELVLAILFVI IVGLGTVAGA FALAIGAIGL LGKLVADSLE
EVDPGVEQAL RATGASRVRV FFAATLPQAL PAFIGHILYQ LDVNFRAATI LGIVGSGGIG
YYLLQASRVR EFETVTTITL MIFGVVMTIE LIAMWLRRTA GAKSGGAA
|
|---|
| |