Gene Snas_4950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4950 
Symbol 
ID8886157 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5258219 
End bp5259469 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content71% 
IMG OID 
Productaminotransferase class I and II 
Protein accessionYP_003513684 
Protein GI291302406 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCGTCT CAGCCACCTT GGCCGTCAAC GAAGCCATCC GTGCCAAACG AGAGTCCGGG 
AAATACGTCC TTCCACTGGG GTTCGGCGAG GCGGGTCTTC CCGTCCACCG CAGTCTCACC
GACCGACTGT CCCGATACGC CGGACGCAAC GGCTACGGCT CGGTGGCGGG CGTGCCGCAA
CTGCGCGAGG CCGCCGCCGG ATACTGGAGC CGCCGCGACC TTCGCACCGA ACCGTCCCAG
GTGATCGCCG GGCCCGGTAG CAAACCGCTC CTGTACGCCG CGCTCATGGC GGTCGGCGGC
GACGTCGTAC TGCCGCAGCC CAGCTGGGTC AGCTACGGCG CCCAGGTCGA GATGCTCGGC
GCCACGCCCC TGTACGTGCC CACGATCCCC GGCGACGGCG GCGTCCCGGA CCCGCAGCGC
CTCAAGGACT ACCTGGACCA CGCCCGCACC ATCGGCCGGG ACGTGCGCGC CATGGTCATG
ACCCTGCCGG ACAACCCGAC GGGAACCCTG GCCGCACCCG AGATCATCCA CCGGGCCTGC
GACATCGCCC GCGAGTACGA CCTGGTCATC ATCGCCGACG AGATCTACCG CGACCTCGTC
TTCGACGCGG GCCGCGCCTA CGTCAGCCCG GCCGACATCG CTCCCGAGCG CACAATCATC
ACCACCGGCC TGTCCAAATC GCTGGCCCTG GGCGGCTGGC GCATCGGCGT GGCCCGCGTA
CCCGACTCCG CGCTCGGCGA CGAACTGCGC GAACGCATGC TCACCATCGC CAGCGAGATC
TGGTCCAGCC CCTCGGCCCC CGTTCAGCAC GCGGCGGCCT ACGCCTACAC CGAACCGGCC
GAACTGCGCG ACCACATCGC CGACTCCCGC CGCCTCCACG CCACCGTCGC CCGCGCGGTC
GCGGGCCACT TCGGCGCGGC CGGAGCCGAG GTCGCCGTCC CCGACGGCGG CTTCTACCTC
TACCCGGACC TGGCCCCCTA CCGCTCCCAC CTGGAGGCCA AGTGGTCGGT CAAGACCGGG
GCCGACCTCA GCGAACTCCT CCTCGACCGC TACGCGGTCG GGGTCCTGCC GGGCAGCGCG
TTCGGCGACG GCATCAAGGA ACTCAAACTC CGCGTGGCCA CCAGCCAGCT CTACGGCCAG
ACCGACGCCC AACGCGAGGC GGCGTTGCGC TCGGCCTACC CGCTGATGCT GCCGTGGATC
GCCAAAGCCC TGGACCGACT CGACGAGGTC CTCAAAGACC TGACTCGCTG A
 
Protein sequence
MPVSATLAVN EAIRAKRESG KYVLPLGFGE AGLPVHRSLT DRLSRYAGRN GYGSVAGVPQ 
LREAAAGYWS RRDLRTEPSQ VIAGPGSKPL LYAALMAVGG DVVLPQPSWV SYGAQVEMLG
ATPLYVPTIP GDGGVPDPQR LKDYLDHART IGRDVRAMVM TLPDNPTGTL AAPEIIHRAC
DIAREYDLVI IADEIYRDLV FDAGRAYVSP ADIAPERTII TTGLSKSLAL GGWRIGVARV
PDSALGDELR ERMLTIASEI WSSPSAPVQH AAAYAYTEPA ELRDHIADSR RLHATVARAV
AGHFGAAGAE VAVPDGGFYL YPDLAPYRSH LEAKWSVKTG ADLSELLLDR YAVGVLPGSA
FGDGIKELKL RVATSQLYGQ TDAQREAALR SAYPLMLPWI AKALDRLDEV LKDLTR