Gene Snas_4942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4942 
Symbol 
ID8886149 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5251675 
End bp5252148 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content66% 
IMG OID 
Productalkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 
Protein accessionYP_003513676 
Protein GI291302398 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.2135 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGTCC GTCTCGTCAA AGGTGACAAG GTCGCCGACT TCGCGCTCCC CGATCAGACC 
GGCACCACCC GCAAACTCAG CGAGTTCCTC GCCGAGGGAC CGGTCGTGCT GTTCTTCTAC
CCCGCCGCCA TGACCCGCGG CTGCACCATG GAGAGCTGCC ACTTCCGCGA CCTCGCCACC
GAGTTCGCCG AGGTCGGCGC CCAGCGGGTG GGCATCAGCC GCGACCCCGT GGACAAACAG
CGCAAGTTCG CCGAGATGAA CGACTTCGAC TACCCGCTGC TGTCCGACCG CGAGGGCGCG
ATCGCCGAAC AGTTCGGCAT CAAGCGGTCG ATTCCGCTGG GGCCGTTGAG CATCAAGCGC
AAGACCTTCG TCATCGACGT GGACCACACC ATCATGGACG TGTTCCACAG CGAGATCAAC
ATGAACGGCC ACGCCGACCA GGCGCTGGAG GTGCTCAGGC GGCGGGCGGG CTAG
 
Protein sequence
MAVRLVKGDK VADFALPDQT GTTRKLSEFL AEGPVVLFFY PAAMTRGCTM ESCHFRDLAT 
EFAEVGAQRV GISRDPVDKQ RKFAEMNDFD YPLLSDREGA IAEQFGIKRS IPLGPLSIKR
KTFVIDVDHT IMDVFHSEIN MNGHADQALE VLRRRAG