Gene Snas_4941 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4941 
Symbol 
ID8886148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5251030 
End bp5251551 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content70% 
IMG OID 
Producttranscriptional regulator, MarR family 
Protein accessionYP_003513675 
Protein GI291302397 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.497711 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.847293 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCCAG CACAATCACC GGCCGACGCG GTGGACGCGA TCGTCGGGCA GTGGCGGCGG 
GAACGACCCG ATCTCGACCT GGACTCGATG GCGATCTTCG GACGCATCCA CCGGGTCTCG
GAACTGTCCC GACGCCGCTT GAAGAGCGTG TTCGCGCCCT TCGGCATCGG TCTGAGCGAG
TTCGACGTCG TGGCGACCCT GCGCCGCTCC GGAGAGCCGT TCGAGTTGAG CCCCAAGGAA
CTCAGCCGCA CCCTGATGCT CACCTCCGGC GGCCTCACCG GACGACTGGA CAAGCTGGAG
CGAGCCGGGC TGATCGAACG CAGGCCCGAC CCCAGCGACC GCCGGGGCCT GCGCATCCGG
CTCACCGAGG CGGGCTGGCG GGCCGCCGAC GAGGCGGTCA CCGCCGAGAT CGACGAACTG
GCGCGGGTGC TCAGCAGCGC GCTGTCACCG GCCGAGGCGC GGACCCTCGG CGAACTGCTG
CGAAAACTGC ACGGCCCCTA CGCCGGAGAT TCGCTCGACT GA
 
Protein sequence
MEPAQSPADA VDAIVGQWRR ERPDLDLDSM AIFGRIHRVS ELSRRRLKSV FAPFGIGLSE 
FDVVATLRRS GEPFELSPKE LSRTLMLTSG GLTGRLDKLE RAGLIERRPD PSDRRGLRIR
LTEAGWRAAD EAVTAEIDEL ARVLSSALSP AEARTLGELL RKLHGPYAGD SLD