Gene Snas_4928 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4928 
Symbol 
ID8886135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5238492 
End bp5239151 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content70% 
IMG OID 
ProductDimethylmenaquinone methyltransferase 
Protein accessionYP_003513662 
Protein GI291302384 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.17069 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0179831 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGCGTCC GCGACCACCC CGGCTTGGGT AACCTCAGCG CTGTGACCAC CGGATTCGAG 
AACGTACCCA CCACCGCCCT CGCCGACGTC CTGGGCCGCG CCCAGGTCAT GGACACCGGG
ATCCGTCCAC TGTGGCAACC GGTTCCGTCC GTCGCGGGCC CGGCGTTCAC GGTGCGCTGC
CCGCCCGGCG ACAACCTGAT GCTGCACGCC GCGATCTACC GGGCCGAGCC CGGTGCGGTC
ATCGTCGTCG AATCCGGCGA CCTCGACTAC GCGCTGGCGG GCGGCAACGT CTGCGCGGTC
GCGCAGCGGC GTGGCGTCGC GGCCTTCGTC GTCGACGGAC TCATCCGCGA CCTGGCCGAA
GTCCGCGACA ACGGCTTCCC CGTGTTCGCA CGCGGCGTCA TCCCGATCCC GGGCACCAAG
AAGGCCGTTG CCCCGCTCAA CGGCGAAGTG CGATGCGGTG GCGTCACCGT CAACGGCGGC
GACATCGTCG TGGCCGACGA GGAAGGCGTC GTCGTCACCC CGTTCGCCCG CCGCGACGAG
GTGGTCGCCG CCGCGCGCGA GAAGCTCGCC AAGGAGGAGG CGCAAACGCT CGACGACTGG
GAGGCCGAGC ACCGCGCCCG TATCGACAAG ATCCTCACCG ACAACAACTT CGAAGGCTGA
 
Protein sequence
MSVRDHPGLG NLSAVTTGFE NVPTTALADV LGRAQVMDTG IRPLWQPVPS VAGPAFTVRC 
PPGDNLMLHA AIYRAEPGAV IVVESGDLDY ALAGGNVCAV AQRRGVAAFV VDGLIRDLAE
VRDNGFPVFA RGVIPIPGTK KAVAPLNGEV RCGGVTVNGG DIVVADEEGV VVTPFARRDE
VVAAAREKLA KEEAQTLDDW EAEHRARIDK ILTDNNFEG