Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_4923 |
Symbol | |
ID | 8886130 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 5233787 |
End bp | 5234962 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | type I phosphodiesterase/nucleotide pyrophosphatase |
Protein accession | YP_003513657 |
Protein GI | 291302379 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.894226 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.019895 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGATCG ACGCCGAACT ATATGAACCC GCCTCGCCGC GCTACGGGGA GGCCGCCCTG AGCGACATCC TGCCGTCGGT GCTGGCGGCG CTCAAGGTTC CGGACGGCAA CGACGTCCTC GGCCTGGCCG ACGCCGAACT GGCCGACATC CGCCGCGTCG TGGTGCTGCT GGTCGACGGC CTTGGATACC ACCTGCTGCG CGAGGCGGCC GCCAGTTCCG AGTACCTGGC CGCCGCCGTC GACGGCGAAC TGGGCACGCT GCGCGAACTG ACCACGAACT ACCCATCCAC CACCCCCACC AGCATCGCCT CGCTCAACAC CGGCGTCGCG CCCGGCCAGC ACGGCCTGAC CGGCTTCACG GTCAACATCC CCGGTACCGA GGACATGCTC ACCCATATCG CCTGGGGCCC CGACGGTCCC GATCCGCGCT CCTGGCAGCC GGTGCCCACC TGCTACGAGC GCGCCGCCGC CGCGGGGGTG GCGACCACGA TCGTGCACCG GCCCGAGTTC GTCGACGCCG GACTCACCGA GGCGATCTTC CGGGGCGGCG CCATCGCCCC CGCCGACAGT CTCGCCGAGA CCGCCCAGGA GGTCCACAAG GCGCTGTCGC AGGGCGACCG CTCGCTCGTG TACTGCTACT ACGGCTATGT GGACAAGCGC GGCCACGGCT ACGGGCCCGG CTCGGCGCCC TGGCACGCGG CCGTGGCCAA CGTCAACCGG CTGCTGCGGC TCATCACCAA CGGCCTGCCC GCCGACGCCG CGCTGCTGGT CACCGCCGAC CACGGCATGA TCGAGGTTCC CCGCGAGGAC CACATCGACC TGGCCGACCA CCCTCACCTG CGCGACGGGG TGCGCCTGGT CGTCGGCGAA CCCCGGTCCC GCTACGTCCA CACCCGGCCG GGCGCTGTGG CCGACGTGGC CGCCGCCTGG CGCGAGACGC TGGGCGACCG CGTCGAGGTC CTCACCCGGG ACGAGGCGGT GGCCACCGGC CGGTTCGGCA CGGTCACCCC GGAGCACCTG CCCCGCATCG GCGACGTCGT GGTCACCGGC AACCGGCGCC ACGTCATCAT CGGCGGCGAC TCCGACATCC CACCGCTGAA CAGCTTCGTC GGATTCCACG GCGGCCTCAC CGCCGCCGAG CTGGCGATTC CGCTGTGGAG TTACCGAGTG TCGTAA
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Protein sequence | MEIDAELYEP ASPRYGEAAL SDILPSVLAA LKVPDGNDVL GLADAELADI RRVVVLLVDG LGYHLLREAA ASSEYLAAAV DGELGTLREL TTNYPSTTPT SIASLNTGVA PGQHGLTGFT VNIPGTEDML THIAWGPDGP DPRSWQPVPT CYERAAAAGV ATTIVHRPEF VDAGLTEAIF RGGAIAPADS LAETAQEVHK ALSQGDRSLV YCYYGYVDKR GHGYGPGSAP WHAAVANVNR LLRLITNGLP ADAALLVTAD HGMIEVPRED HIDLADHPHL RDGVRLVVGE PRSRYVHTRP GAVADVAAAW RETLGDRVEV LTRDEAVATG RFGTVTPEHL PRIGDVVVTG NRRHVIIGGD SDIPPLNSFV GFHGGLTAAE LAIPLWSYRV S
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