Gene Snas_4923 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4923 
Symbol 
ID8886130 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5233787 
End bp5234962 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content72% 
IMG OID 
Producttype I phosphodiesterase/nucleotide pyrophosphatase 
Protein accessionYP_003513657 
Protein GI291302379 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.894226 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.019895 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGATCG ACGCCGAACT ATATGAACCC GCCTCGCCGC GCTACGGGGA GGCCGCCCTG 
AGCGACATCC TGCCGTCGGT GCTGGCGGCG CTCAAGGTTC CGGACGGCAA CGACGTCCTC
GGCCTGGCCG ACGCCGAACT GGCCGACATC CGCCGCGTCG TGGTGCTGCT GGTCGACGGC
CTTGGATACC ACCTGCTGCG CGAGGCGGCC GCCAGTTCCG AGTACCTGGC CGCCGCCGTC
GACGGCGAAC TGGGCACGCT GCGCGAACTG ACCACGAACT ACCCATCCAC CACCCCCACC
AGCATCGCCT CGCTCAACAC CGGCGTCGCG CCCGGCCAGC ACGGCCTGAC CGGCTTCACG
GTCAACATCC CCGGTACCGA GGACATGCTC ACCCATATCG CCTGGGGCCC CGACGGTCCC
GATCCGCGCT CCTGGCAGCC GGTGCCCACC TGCTACGAGC GCGCCGCCGC CGCGGGGGTG
GCGACCACGA TCGTGCACCG GCCCGAGTTC GTCGACGCCG GACTCACCGA GGCGATCTTC
CGGGGCGGCG CCATCGCCCC CGCCGACAGT CTCGCCGAGA CCGCCCAGGA GGTCCACAAG
GCGCTGTCGC AGGGCGACCG CTCGCTCGTG TACTGCTACT ACGGCTATGT GGACAAGCGC
GGCCACGGCT ACGGGCCCGG CTCGGCGCCC TGGCACGCGG CCGTGGCCAA CGTCAACCGG
CTGCTGCGGC TCATCACCAA CGGCCTGCCC GCCGACGCCG CGCTGCTGGT CACCGCCGAC
CACGGCATGA TCGAGGTTCC CCGCGAGGAC CACATCGACC TGGCCGACCA CCCTCACCTG
CGCGACGGGG TGCGCCTGGT CGTCGGCGAA CCCCGGTCCC GCTACGTCCA CACCCGGCCG
GGCGCTGTGG CCGACGTGGC CGCCGCCTGG CGCGAGACGC TGGGCGACCG CGTCGAGGTC
CTCACCCGGG ACGAGGCGGT GGCCACCGGC CGGTTCGGCA CGGTCACCCC GGAGCACCTG
CCCCGCATCG GCGACGTCGT GGTCACCGGC AACCGGCGCC ACGTCATCAT CGGCGGCGAC
TCCGACATCC CACCGCTGAA CAGCTTCGTC GGATTCCACG GCGGCCTCAC CGCCGCCGAG
CTGGCGATTC CGCTGTGGAG TTACCGAGTG TCGTAA
 
Protein sequence
MEIDAELYEP ASPRYGEAAL SDILPSVLAA LKVPDGNDVL GLADAELADI RRVVVLLVDG 
LGYHLLREAA ASSEYLAAAV DGELGTLREL TTNYPSTTPT SIASLNTGVA PGQHGLTGFT
VNIPGTEDML THIAWGPDGP DPRSWQPVPT CYERAAAAGV ATTIVHRPEF VDAGLTEAIF
RGGAIAPADS LAETAQEVHK ALSQGDRSLV YCYYGYVDKR GHGYGPGSAP WHAAVANVNR
LLRLITNGLP ADAALLVTAD HGMIEVPRED HIDLADHPHL RDGVRLVVGE PRSRYVHTRP
GAVADVAAAW RETLGDRVEV LTRDEAVATG RFGTVTPEHL PRIGDVVVTG NRRHVIIGGD
SDIPPLNSFV GFHGGLTAAE LAIPLWSYRV S