Gene Snas_4919 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4919 
Symbol 
ID8886126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5230247 
End bp5230903 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content67% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003513653 
Protein GI291302375 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.649395 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.058246 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATGACC GTCTCCCGGT TCGCGATGAG CTGTACCTGT TGGCACACAA CGAATCTGGT 
AAACCGCTCA TCGCGATGCC ACTGCTGGGT CTCGGCCTGG CCGCCGCGCT GCTCATCGAG
CTGACCATGT CCCGTCACGT CGACGTCGAC TTCGACAAGG TCGTGACGAG GCCGCAGCCC
GCCAACTTCT CGCAACGCTC CCTGTCCAGC ATCGCCAACA ACGCACTGTC CGAACTGTAC
CGTTCCCGCA ACCGGCCGCC GAGCCCGGTC AACGTCCTCT TGGTGTGGAG CGAGGACATC
TACGAACGTG TGCGCGGCGA ACTGCTGGCC GCCAACCTGG TCTCCCCCAT CACCGTCCGC
CGCTTCGGCC TGCTGTCGGG CACCGAGTAC CGCTCCGACG AGGCCGCCAT CGTGCGCTCC
CGCACGGCGC TGCGCCGCGT CGTCATGTCC GAGGCCAGCC CCTCGGCCGA GGACGCCGCA
CTGTGCGGGC TGCTCGTCGA CCTGCAACTG GAGCGCAGCC TGCACCTCAA CGTCAACGCC
GGTTGGCTGC GGCAGATGCT CAAGTCCATC GGCGCCCGCC AGCCGATCCC GATCCGGCGG
ATCGTCGACG CGCTCACCGA GGCGGTGCGG TACAAATCCA CACACGGCAC CATCTGA
 
Protein sequence
MNDRLPVRDE LYLLAHNESG KPLIAMPLLG LGLAAALLIE LTMSRHVDVD FDKVVTRPQP 
ANFSQRSLSS IANNALSELY RSRNRPPSPV NVLLVWSEDI YERVRGELLA ANLVSPITVR
RFGLLSGTEY RSDEAAIVRS RTALRRVVMS EASPSAEDAA LCGLLVDLQL ERSLHLNVNA
GWLRQMLKSI GARQPIPIRR IVDALTEAVR YKSTHGTI