Gene Snas_4880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4880 
Symbol 
ID8886087 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5182877 
End bp5183635 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content67% 
IMG OID 
ProductANTAR domain-containing protein with unknown sensor 
Protein accessionYP_003513614 
Protein GI291302336 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCGA TCCGTGAACA CCGGCTGGCG GAGACTTTCG TCGAACTGGC CGACACTCTC 
GTCGCGAATT TCGACGTCGT GGACTTCACC CACGTGCTGG CGAATCGCTG CGTCGAGCTG
CTCGACGCCG CCGCCGTCGG GCTGATGCTC ATCGATCAGC ATTCGCAGCT GCGGGTCATC
GCCTCCTCCG ACGAACAGTC CCGGGTCCTG GAGTTGTTCG AGCTGGAGGC CGACCACGGG
CCGTGCTTGG AGTGCTTCCG CACCGGTCAC CAGGTCGCCG ATCCGGATCT GCGGGACGCC
GACACCCGAT GGCCGCGATT CGCCGCCAAG GCCGTGGAAG CCGGATACCT CGCGGTGCAG
GCGATCCCGA TGCGACTGCG GGGCGAGACC ATCGGGGTGC TCAATCTGTT CCGGCAACAA
CCGGGCGCAT TGGACGAGAC GCTGCTGCGC ACCGGGCAGG CGCTGGCCGA CGTCGCCACC
ATCGGCCTGC TGCACGAGCG GGCGGTTCGC CACCACCAGA TCCTCGCCGA GCAGTTGCAG
GGCGCGCTCA ACAGCCGGGT GGTCATCGAG CAGGCGAAGG GTCTGCTGTC CGAGCGCTTC
AATGTGGATA TGCCCACGGC GTTCGTCGTC ATGCGCAAGT TCGCGCGCCG GACCAACCGC
AAACTCAGCG ACGTGGCCCA GGACGTCGTC TCCGGACGGC TCGAGACCCG CGAGCTGGTG
GTGCCGATGG ACAAGGCCAC CGAACCCGAG CCGACGTGA
 
Protein sequence
MNAIREHRLA ETFVELADTL VANFDVVDFT HVLANRCVEL LDAAAVGLML IDQHSQLRVI 
ASSDEQSRVL ELFELEADHG PCLECFRTGH QVADPDLRDA DTRWPRFAAK AVEAGYLAVQ
AIPMRLRGET IGVLNLFRQQ PGALDETLLR TGQALADVAT IGLLHERAVR HHQILAEQLQ
GALNSRVVIE QAKGLLSERF NVDMPTAFVV MRKFARRTNR KLSDVAQDVV SGRLETRELV
VPMDKATEPE PT