Gene Snas_4856 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4856 
Symbol 
ID8886063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5156616 
End bp5158691 
Gene Length2076 bp 
Protein Length691 aa 
Translation table11 
GC content68% 
IMG OID 
ProductPeptidyl-dipeptidase Dcp 
Protein accessionYP_003513590 
Protein GI291302312 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.112436 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.639922 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGTACCC TGACCTGGGT GACCGACGAG AACCCCTTCA CAGCGCCCAG CACACTGCCG 
TACCAGCTGC CACCGCTGGC CGACATCACC GACGCCGATT ACCTGCCCGG CTTCGAGATC
GGCATGGCCG AGCAGCGCAC CGAGGTCGAG GCGATCGCGG CCGCCACCGA GCCGCCGACC
TTCGACAACA CGGTCGTGGC GCTGGAACGC ACGGGCGGCA CCCTGAGGCG GGTGGCCAAG
GTGTTCTTCA ACAAGGCCGC GGCCGACACC AACGAGCGGG TCCGCGAGGT CCAGAGCCGG
GTGGCACCGC TGCTGTCGGC GCACCGCGAC GCGATCACTT TGGACGAACG ACTCTTCGCC
CGGGTCGCCG CCGTGTACGA CGCCCTGGAC GACTCCGATC TCGACGACGA GTCCCGCTGG
CTGACCCGCC GCTACCACCT GGACTTCGTG CGCGCCGGAG CGAAACTGTC GGCCACCGAC
AAGGAACGAC TGCGCGCCCT CAACGAGGAA CTGTCCAGTC TGGAGACGTT GTTCGCGCAG
AACCAGCTGG CCGCCACCAA CGCGGCCGCG GTCATTGTCG ACGACGCCGA GCGCCTGGAC
GGACTCTCCC AGGGCTCCAT CGAGACGGCG GCCTCGGCCG CCGCCGACCG GGGCCTTTCC
GGGAAATACC TGTTGACGCT CAACAACCAC ACGGTGCCCA GCCAACTGGA ATCCCTCACC
GACGCCGAGC TGCGCCGCGA GCTGTACCAA GCCTCGATCG CCCGCGGCAA CGACGGCGCC
GCCCACGACA ACTCCGCCAC CCTGCTGCGC ATCGTCCGCC TGCGCGCCGA ACGCGCCCGC
CTGCTGGGCT ACGACAACCA CGCGGCGTAC ATCATCGAAG ACCAAACCGC CGACTCGGCG
ACCGTCGTCG CCGAACGTCT GGCCAAACTG GCCGCCGCCG CGGTGGCCAA CGTCCGCGTC
GAAGCCGCCG AACGCGCCGA GGTCCTGGGC CAGGACTCCC TCGAACCCCA GGACTGGGCC
CTGGCCACCG AACAGCTGCG CGCCAAGCAC TACGACCTCG ACGGCGAGGC GATGCGCCCC
TACCTCGAAC TCGACAGCGT CCTCACCAAC GGCGTCTTCC ACGCCGCCAA CCAGCTGTAC
GGCATCACCT TCACCGAACG GTTCGACCTC CCGGTCTACC ACCCCGACGT CCGCGTCTTC
GAGGTCTTCG ACGCCGACTC CACCCCCCTC GGCCTCTTCT TGGCCGACTT CTACTCCCGC
GACTCCAAGA ACGGCGGCGC GTGGATGAAC TGCCTGGTCG ACCAGTCCCG CCTGTTCGAC
CAGCGCCCCG TCGTCGTCAA CAACCTCAAC ATCCCCAAAC CCCCACCGGG CACCAAAACG
CTGCTGACCT TCACCGAGGT CACCACGATG TTCCACGAGT TCGGCCACGC CCTGCACGGC
CTGTTCTCCG ACGTCCACTA CCCCCGCTTC ACGGGCACCA CGGTGCCGCG CGACTTCGTC
GAGTACCCCT CACAGGTCAA CGAGATGTGG AGCCTGTGGC CCCGAGTACT GGCCAACTAC
GCCCGCCACC ACGAGACCGG CGAGGTCATG CCGGACAAGC TTCGCGAGAA ACTGGTGGCC
TCGCAAGGCT TCAACGAGGG CTTCAAGACC ACCGAATACC TGGCCGCGGC CCTGCTCGAC
CAGGCCTGGC ACCGCCTCAG CCTGGACGAG GTCCCCGACG ACGCCGACCC CCGGGCCACA
GTAGAACGCT TCGAGGCCGA AGCCCTGGCG GCAGCCGGAA TCAACGTCCC CGAAGTCCGC
CCCCGCTACC GCAGCACCTA CTTCGGACAC ATCTTCGCGG GCGGCTACTC GGCCGGGTAC
TACTCCTACA TCTGGAGCGA GATCCTCGAC GCCGACACGG TGGAGTGGTT CAAGGACAAC
GGCGGCCTCG AACGCGACAA CGGCGACCGC TTCCGCCAGC GCCTGCTGGC CAAGGGCGGC
AGCGTCGACC CGATGGCCGC CTTCCGCGAC TTCGCCGGCC GCGACCCCCG CATCGAACCC
CTGCTGACCC GCCGCGGCCT CGACGCCGCG AACTGA
 
Protein sequence
MGTLTWVTDE NPFTAPSTLP YQLPPLADIT DADYLPGFEI GMAEQRTEVE AIAAATEPPT 
FDNTVVALER TGGTLRRVAK VFFNKAAADT NERVREVQSR VAPLLSAHRD AITLDERLFA
RVAAVYDALD DSDLDDESRW LTRRYHLDFV RAGAKLSATD KERLRALNEE LSSLETLFAQ
NQLAATNAAA VIVDDAERLD GLSQGSIETA ASAAADRGLS GKYLLTLNNH TVPSQLESLT
DAELRRELYQ ASIARGNDGA AHDNSATLLR IVRLRAERAR LLGYDNHAAY IIEDQTADSA
TVVAERLAKL AAAAVANVRV EAAERAEVLG QDSLEPQDWA LATEQLRAKH YDLDGEAMRP
YLELDSVLTN GVFHAANQLY GITFTERFDL PVYHPDVRVF EVFDADSTPL GLFLADFYSR
DSKNGGAWMN CLVDQSRLFD QRPVVVNNLN IPKPPPGTKT LLTFTEVTTM FHEFGHALHG
LFSDVHYPRF TGTTVPRDFV EYPSQVNEMW SLWPRVLANY ARHHETGEVM PDKLREKLVA
SQGFNEGFKT TEYLAAALLD QAWHRLSLDE VPDDADPRAT VERFEAEALA AAGINVPEVR
PRYRSTYFGH IFAGGYSAGY YSYIWSEILD ADTVEWFKDN GGLERDNGDR FRQRLLAKGG
SVDPMAAFRD FAGRDPRIEP LLTRRGLDAA N