Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_4841 |
Symbol | |
ID | 8886048 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 5139134 |
End bp | 5140894 |
Gene Length | 1761 bp |
Protein Length | 586 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | 5'-Nucleotidase domain-containing protein |
Protein accession | YP_003513575 |
Protein GI | 291302297 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.374418 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGAATGC CCCGGATCGC CCTGTCCGCC GCCCTGCTCG TCGCCGCCTC GCTCGGTGTC GCCACGCCCG CTGCGGCCGC TGAACCCGTC ACCGTCAAGC TGCTGTCCAT CGCCGACTTC CACGGCCAGC TCGCCCCGCC CCCGGCCAAC GACGGCGGCC AGATCCCCGG CCCGAACGGC TCGAAGGTCA CCGTCGGCGG CGCCGCCTAC CTGGCCACCC ACCTGAAGAA CCTGCGCGCC GACGCCGAGA ACTCGATGCT CATCGCCGCC GGTGACCAGT TCTCCGGTTG GCCGTTCACC GTCGAGATCC ACCGCGACGA ACCCACCGTC GAGGTGCTCA ACAACCTGGG CCTGGACGTC AACGGCGTCG GCAACCACGA GCTGGACGTC TCGCGCGACT TCCTCGTCGA CCACATGGCC AAGGGCGAGT GCTTCGGCGA GATCGGCGAG GACTCCTGCT TCACCGACTC GTCCGGACAG CGGTTCCACG GCGCCGACTT CGACATGTCC ACCGCGAACG TGGTGGCGAA GAACAACGGC GAACCGATCC TGGCGCCGTA CGTGATCAAG GAGATGAAGG CACCCGACGG CAGCACCATC CCGGTCGGCG TCATCAGCAT CACCCCGCCG GGCACCGAGC ACGGCTCGAC GTCGTACCAG ACCGACGTCA CGACGCTCGA CTCCGTCGAG ACGCTCAACA AGTACGCCGC CGAGCTGAAG GCCAAGGGCG TCAACGCGAT CGTCGCCAAC GTCCACGACG GCGCGGCGAA CAGGTCCAGC AGCGCCTCGT ACAACGACTG CGACCTCAAA CCCGACGGTC CGCTGGTGAA GGTCGCCAAC GAGGCCTCGT CCGACATCGA CGCGATCGTC GGCGGCCACT GGCACACCCG CTTCAACTGC ACGCTGCCCG ACCCGGCGGG CAACCCGCGT CCGGTGGTCG AGCCCGGTCA CCACGGCGGC GTCATCAACG AGATCAACCT GGCGCTGGAT CCGGCCACCG GCGAGGTCGA CCGCGCCGCG ACGACCTCGG AGAACCACCC CGTCACCCGC GACGTGACCC CCGACCCGGA AATGCAGGAC ATCGTCGACT ACTGGAACGA GCAGGGCGAC AAGCGCTTCG CGCGTCCGGT CGCGGAGCTG GACGGCGACT TCACCCGCGT CAAGGACGAC TCCGGCGAGA GCACGATGGG CAACCTCACC GCCGACGTCA ACCTGTGGAC CGCCAACCAC TCCCACGGGG GCGAGGCCGA CTTCGCGATC ACGATGACCG ACCCGCACAA GGGCAGCAAC GCCATCCGCG CCGATCTGAA GGTCGCCGAC AGCGGCAAAC CCGGCGACGC CGAGGGCAGA GTCATGGAGG GCGAGGCCTG GGACGCGTAC GGGTACAACA ACCCGGTGCT GACGGTGTCG CTGACCGGCG AACAGATCGA CGCCGCCCTG GAGCAGCAGT GGACCTCGGC GAAGTTCGCG CCGCTGGCGG TGTCGTCGAA CGTCGAGTAC TCGTTCTCGG CCTCGGCGCC GATCGGCTCC AAGGTCGAAC CCGGCGACGT CCGCATCGAC GGCGAACCCC TGGACCCGGA GCGGACCTAC CGGGTCGCCG CGCTGGCGTA CACGCTGCTG GGCAGTGACG GCATCGCCGC GTTCACCGGC TTCACCGAGG CGCACCGCAA CGACCCGCCC GACTTCCTGG CGTTCATCGA ATACCTGGAG CAGGCCGGCA CGCTGGCCCC GGCACCGCTG GATCGCGTGG ACGTCGGGTA G
|
Protein sequence | MRMPRIALSA ALLVAASLGV ATPAAAAEPV TVKLLSIADF HGQLAPPPAN DGGQIPGPNG SKVTVGGAAY LATHLKNLRA DAENSMLIAA GDQFSGWPFT VEIHRDEPTV EVLNNLGLDV NGVGNHELDV SRDFLVDHMA KGECFGEIGE DSCFTDSSGQ RFHGADFDMS TANVVAKNNG EPILAPYVIK EMKAPDGSTI PVGVISITPP GTEHGSTSYQ TDVTTLDSVE TLNKYAAELK AKGVNAIVAN VHDGAANRSS SASYNDCDLK PDGPLVKVAN EASSDIDAIV GGHWHTRFNC TLPDPAGNPR PVVEPGHHGG VINEINLALD PATGEVDRAA TTSENHPVTR DVTPDPEMQD IVDYWNEQGD KRFARPVAEL DGDFTRVKDD SGESTMGNLT ADVNLWTANH SHGGEADFAI TMTDPHKGSN AIRADLKVAD SGKPGDAEGR VMEGEAWDAY GYNNPVLTVS LTGEQIDAAL EQQWTSAKFA PLAVSSNVEY SFSASAPIGS KVEPGDVRID GEPLDPERTY RVAALAYTLL GSDGIAAFTG FTEAHRNDPP DFLAFIEYLE QAGTLAPAPL DRVDVG
|
| |