Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_4826 |
Symbol | |
ID | 8886033 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 5123872 |
End bp | 5124714 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | 3-methyl-2-oxobutanoatehydroxymethyltransferase |
Protein accession | YP_003513560 |
Protein GI | 291302282 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.595604 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCGAGC ACAAAGAAGT GCCGAGCCTG TACGGTCCCG CCCGCAAGAC CAGCCGGGTA CGCACCCGCG ACCTGAAACT GGCCAAGGAA CGCGGCGAGA AGTGGGCGAT GCTCACCAGC TACGACCAGT ACACCGCCGC GATGTTCGAC GAGATCGGCA TCCCGGCGCT GCTCATCGGC GATTCGGCGG CCAACAACGT CTTCGGCTAC GAGACCACGC TGCCGGTCAC GATCGACGAA CTGCTGCCGC TGGTGTCCGC CGTGGTCCGC TCCACCAAAC GCACCCTCGT CGTCGCCGAC CTCCCGTTCG GCTCCTACGA GGCCTCACCC CAGCAGGCCC TGGAGAGCGC GGTGCGGTTC ATGAAGGCCG GAGCCAACGC GGTCAAACTC GAGGGCGGCG TGCGGATGCG CGAGCAGATC GCCGCGCTGA CCGGCGCGGG CATCCCCGTC ATGGCCCACA TCGGCTTCAC CCCGCAAAGC GAGAACCTGG TCGGCGGCTA CCGGGTCGCG GGACGCGGCG AGCACGCCGA CTCCGTCCTG GCCGACGCCT ACGCCGTCGC CGAGGCGGGA GCCTTCGCGG TGGTCCTGGA GATGGTGATG TCCGACGTGG CCGCGCGGGT CACGAAGGAA CTGGAGATCC CGACCATCGG CATCGGCGCG GGCGGCGACA CCGACGCGCA GGTACTGGTG TGGCAGGACA TGGCCGGCCT GCGCCAGGGA CCGGCCCCCC GGTTCGTCAA GCGCTACGCG AACGTCGCCT CCGTCATCGC CGAGGCCGCG AAGACCTACG CCGACGAGGT CAAGAACGGC GCCTTCCCCG CCCCGGAACA CGGCTTCCAC TAG
|
Protein sequence | MSEHKEVPSL YGPARKTSRV RTRDLKLAKE RGEKWAMLTS YDQYTAAMFD EIGIPALLIG DSAANNVFGY ETTLPVTIDE LLPLVSAVVR STKRTLVVAD LPFGSYEASP QQALESAVRF MKAGANAVKL EGGVRMREQI AALTGAGIPV MAHIGFTPQS ENLVGGYRVA GRGEHADSVL ADAYAVAEAG AFAVVLEMVM SDVAARVTKE LEIPTIGIGA GGDTDAQVLV WQDMAGLRQG PAPRFVKRYA NVASVIAEAA KTYADEVKNG AFPAPEHGFH
|
| |