Gene Snas_4826 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4826 
Symbol 
ID8886033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5123872 
End bp5124714 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content69% 
IMG OID 
Product3-methyl-2-oxobutanoatehydroxymethyltransferase 
Protein accessionYP_003513560 
Protein GI291302282 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.595604 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAGC ACAAAGAAGT GCCGAGCCTG TACGGTCCCG CCCGCAAGAC CAGCCGGGTA 
CGCACCCGCG ACCTGAAACT GGCCAAGGAA CGCGGCGAGA AGTGGGCGAT GCTCACCAGC
TACGACCAGT ACACCGCCGC GATGTTCGAC GAGATCGGCA TCCCGGCGCT GCTCATCGGC
GATTCGGCGG CCAACAACGT CTTCGGCTAC GAGACCACGC TGCCGGTCAC GATCGACGAA
CTGCTGCCGC TGGTGTCCGC CGTGGTCCGC TCCACCAAAC GCACCCTCGT CGTCGCCGAC
CTCCCGTTCG GCTCCTACGA GGCCTCACCC CAGCAGGCCC TGGAGAGCGC GGTGCGGTTC
ATGAAGGCCG GAGCCAACGC GGTCAAACTC GAGGGCGGCG TGCGGATGCG CGAGCAGATC
GCCGCGCTGA CCGGCGCGGG CATCCCCGTC ATGGCCCACA TCGGCTTCAC CCCGCAAAGC
GAGAACCTGG TCGGCGGCTA CCGGGTCGCG GGACGCGGCG AGCACGCCGA CTCCGTCCTG
GCCGACGCCT ACGCCGTCGC CGAGGCGGGA GCCTTCGCGG TGGTCCTGGA GATGGTGATG
TCCGACGTGG CCGCGCGGGT CACGAAGGAA CTGGAGATCC CGACCATCGG CATCGGCGCG
GGCGGCGACA CCGACGCGCA GGTACTGGTG TGGCAGGACA TGGCCGGCCT GCGCCAGGGA
CCGGCCCCCC GGTTCGTCAA GCGCTACGCG AACGTCGCCT CCGTCATCGC CGAGGCCGCG
AAGACCTACG CCGACGAGGT CAAGAACGGC GCCTTCCCCG CCCCGGAACA CGGCTTCCAC
TAG
 
Protein sequence
MSEHKEVPSL YGPARKTSRV RTRDLKLAKE RGEKWAMLTS YDQYTAAMFD EIGIPALLIG 
DSAANNVFGY ETTLPVTIDE LLPLVSAVVR STKRTLVVAD LPFGSYEASP QQALESAVRF
MKAGANAVKL EGGVRMREQI AALTGAGIPV MAHIGFTPQS ENLVGGYRVA GRGEHADSVL
ADAYAVAEAG AFAVVLEMVM SDVAARVTKE LEIPTIGIGA GGDTDAQVLV WQDMAGLRQG
PAPRFVKRYA NVASVIAEAA KTYADEVKNG AFPAPEHGFH