| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_4774 |
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| Symbol | |
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| ID | 8885980 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | + |
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| Start bp | 5068859 |
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| End bp | 5069521 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | |
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| Product | transcriptional regulator, TetR family |
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| Protein accession | YP_003513509 |
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| Protein GI | 291302231 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0197844 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.000543093 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGACTACA GTCCGGTTGT GCCTGAGAAG AGTACCGGAC CGCAGTCCGC TTATGTGGAG
CTGTCGCAGT TGCGTACGCC ACAGCCGTCC GAACGCGCCG ACGCCGCCCG CAATCGCGCC
GCCATCGTCG AGGCCGCCGC CCGGCTGTTC GCCGAACACG GCGTCGACGC GGTGTCCATG
GACGCCATCG CCGCCGCCGC GGGCGTCGGC AAGGGAACGC TGTTCCGCCG CTTCGGCGAC
AAGAGCGGCC TGGCCAACGC GCTGCTGGAC ACCCGGGAAC GGGAACTGCA ACAGCGCATC
CTCAGTGGCG AGCCGCCGCT GGGACCGGGA GCGCCACCCG GCGAACGACT CGAAGCGTTC
ACCGTCGCGT ACCTGGACTA CCTGCTGCCG CACGTCGAGC TGGTGCGGAT GTCCGAGACG
GCGTCGCCGG GAGCGCGGTA CCGCATCGGC GCGTACCGGT TCTGGCACCG GCACGTGGCG
ATCCTGCTGA CGGAAATGCG GGAGTTTCCC GATCCGGAGG TCGGCGCGCA CGTGATACTG
GCCCCGATGG CCGCCGAACT GGTCGCCGTC ACGGCACGGG AACTGGGGAC ACGGCGGGTT
CGCGACGGCG TCATCGAGCT CGTCCGTCGT GTGCTCCGCG ACGAGACGAG GGAGCGATCA
TGA
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| Protein sequence | MDYSPVVPEK STGPQSAYVE LSQLRTPQPS ERADAARNRA AIVEAAARLF AEHGVDAVSM
DAIAAAAGVG KGTLFRRFGD KSGLANALLD TRERELQQRI LSGEPPLGPG APPGERLEAF
TVAYLDYLLP HVELVRMSET ASPGARYRIG AYRFWHRHVA ILLTEMREFP DPEVGAHVIL
APMAAELVAV TARELGTRRV RDGVIELVRR VLRDETRERS
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