| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_4771 |
|---|
| Symbol | |
|---|
| ID | 8885977 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | - |
|---|
| Start bp | 5067103 |
|---|
| End bp | 5067939 |
|---|
| Gene Length | 837 bp |
|---|
| Protein Length | 278 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | alpha/beta hydrolase fold protein |
|---|
| Protein accession | YP_003513506 |
|---|
| Protein GI | 291302228 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0144083 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.000189374 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGTTAAAG AATTCGACGT CACACTCGCC GACGGCCGCA CCCTGCACGG CTACGACACC
GGCGGCGAGG ACCGGATGCC GGTCGTGTGG CATCACGGCA CCCCCAACGT CGGCGCGCCC
CCGGCGCCGC TGTTCGTCGA ATCCGAGCGG CTGGGCATCC GCTGGGTCTC CTACGACCGC
CCCGGCTACG GTACTTCGAC GCCCCGGCCG GGACGCGACT TCGCCTCGGC CGCCGGTGAC
GTCGCCGCGA TCGCCGACGC GCTGGGCATC GACCGGTTCG CGGTCATGGG CCACTCCAGC
GGCGGCCCGC ACGCGCTGGC CTGCGCCGCG TTGCTGCCCG AGCGGGTCAC CGGCGTGGTC
GCCGCCTCGG CGCTGGCGCC GTTCGACGCC GAGGGACTGG ACTGGTTCGC CGGGATGGCC
GACGGCGCGG CGGCCTCGCT GCGGGCGTCG GCGGCCGGAC GTGCCGCCAA GGAGAAGTAC
GAGGAGACCG CCGAGTTCGA CGAGGCGATG TTCATCCCCG CCGACTATGA AGCGCTGAAT
GGACAGTGGT CCTGGTTCAA CGAGGTGGTG CGCGCGGCGG CGGCCAACGG TCCGTCCCCT
CTGATCGACG ATGATCTCGC CAACGTCGGC GACTGGGGCT TCGACCCGCG CGACGTCACC
GTGTCCACAC TGGTCATGCA TGGTGCGAAG GACCGGCTGA TTCCGAGCAG CCACGGCGTT
TGGCTGGTCG AACACCTGCC CAACGCGCGG CTGCGGCTGC TGCCCGGGGA CGGGCACATC
TCGGTCATGA ACTCAGCGAC CGAGGGGCTG GAGTTCCTCG CCGCCCTCGG TCGCTGA
|
|---|
| Protein sequence | MVKEFDVTLA DGRTLHGYDT GGEDRMPVVW HHGTPNVGAP PAPLFVESER LGIRWVSYDR
PGYGTSTPRP GRDFASAAGD VAAIADALGI DRFAVMGHSS GGPHALACAA LLPERVTGVV
AASALAPFDA EGLDWFAGMA DGAAASLRAS AAGRAAKEKY EETAEFDEAM FIPADYEALN
GQWSWFNEVV RAAAANGPSP LIDDDLANVG DWGFDPRDVT VSTLVMHGAK DRLIPSSHGV
WLVEHLPNAR LRLLPGDGHI SVMNSATEGL EFLAALGR
|
|---|
| |