| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_4759 |
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| Symbol | |
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| ID | 8885965 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | - |
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| Start bp | 5058124 |
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| End bp | 5059365 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | |
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| Product | putative RNA polymerase sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003513494 |
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| Protein GI | 291302216 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00302536 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000266269 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACGGGCC GCCACGCCGA GGACCTGCTG CGCGACCTCG CGCCCCGGGT CCTCGGCGCC
GTCGTGCGCC GCTACGGTAA CTTCGCGCTC GCCGAAGACG CCGTCCAGGA AGCATTGCTG
GCGGCGGCGA CCCGATGGCC CGCCGAGGGC GAGCCACGGG ACCCGCGCGG TTGGCTGATC
ACGGTCGCGT CGCGGCGATT GACCGACCTG CTGCGCGCCG AACAGGCCCG CCGCCGACGC
GAAGACCAAG TAGCACAGTG GACGATCTCG GCGGACCGGC TGGCGCCCGC CGCCGACGAG
CCGCAGGTCG CCGCCGACGA CACGCTGGTG CTGCTGTTCC TGTGCTGCCA CCCGGAACTG
AGCACCGCCT CGCAGATCGC GCTGACCCTG CGAGCCGTCG GTGGTCTCAC GACGGCCGAG
ATCGCGCGGG CGTTCCTGGT TCCCGAGTCG ACGATGACGC GGCGCATCAC CCGCGCCAAG
CAGACCATCG CCGACAGCGG CGCGCGGTTC CGGATGCCGG ACGGAACCGA ACGCGCTGGG
CGGCTCTCGG CCGTCCTGCA CGTGCTGTAC CTGATCTTCA ACGAGGGCTA CGCCAGCACA
TCCAGCGGTG AACTGCAACG CGTCGAACTG GCCACCGAGG CCATCCGGTT GGCACGAACC
GTCCACAAGC TCGTGCCCGA CGACGGCGAG GTCTCGGGGC TGCTGGCTCT GATGCTGCTC
ACCGACGCGA GAAGCCCGGC CCGCGCGACA CCCGACGGGG CGCTGATTCC CATGTCCGAG
CAGGACAGAT CGCTGTGGAG GGCCGACGCG ATCGCTGAGG GAACGGAGCT CATCACCCGG
GCGCTGCCGG TGGGGCCCAC GGGGCCGTAC CAGTTGCAGG CGGCGATCGC CGCGCTCCAC
GACGAGGCTG CCTCGGCCGA GGACACCGAC TGGGCGCAGA TCAAAGCGCT GTACGAGCTG
CTGCTGCGCA TCTGGGACAA CCCGATGGTG GAGCTCAACC ACGCGGTAGC GGTCGCGATG
GCCGACGGGG AGCGGGAGGG CCTGCGGCGG TTGGAGGAGC TGCGCGGGCG GGAACGGTTG
GCGGGGGACT ACCGGCTTTC GGCGGTGCGG GCGCATCTGC TGGAACGGCT GGGGGAGAAG
GAAGCGGCGC GTGAGGAGTA TCTCGCGGCG GCCCGGCGGG CGACCAACCG TCCACAACAG
CGTTACCTTC GGGACCGGGC CGCGGGGTTG TCCGCGCACT GA
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| Protein sequence | MTGRHAEDLL RDLAPRVLGA VVRRYGNFAL AEDAVQEALL AAATRWPAEG EPRDPRGWLI
TVASRRLTDL LRAEQARRRR EDQVAQWTIS ADRLAPAADE PQVAADDTLV LLFLCCHPEL
STASQIALTL RAVGGLTTAE IARAFLVPES TMTRRITRAK QTIADSGARF RMPDGTERAG
RLSAVLHVLY LIFNEGYAST SSGELQRVEL ATEAIRLART VHKLVPDDGE VSGLLALMLL
TDARSPARAT PDGALIPMSE QDRSLWRADA IAEGTELITR ALPVGPTGPY QLQAAIAALH
DEAASAEDTD WAQIKALYEL LLRIWDNPMV ELNHAVAVAM ADGEREGLRR LEELRGRERL
AGDYRLSAVR AHLLERLGEK EAAREEYLAA ARRATNRPQQ RYLRDRAAGL SAH
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