Gene Snas_4746 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4746 
Symbol 
ID8885952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5047713 
End bp5048378 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content64% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003513481 
Protein GI291302203 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.404087 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.765345 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAAGA CCTCGTCCCG CAAGAACCAC AAGGGCAAGG GCAAGCCCAA ACGCAAACCC 
ACCGCCGCCA AACGCGGCAT CCCGTGGTGG ACGGTCTCCG TCGTCGCTCT GGTCCTCGTC
GCTGTCGGCG TCTTCGGCTA CGGCATCTGG TCGCAACCCA GCGCACCGGA AGACGCCGAC
ATCGACGGGC TCGTCAACTA CAAAGCCCAG AAGGCCAAAT GGTTCGACGA CCGCGACCAC
AAATCCGGCC CTCTCAAGTA CGCCACCACT CCCCCCGCGG GCGGCAACCA CAACGCGACC
TGGCAGACCT GCACCGGCAT CGTCTACGAC AAGCCGATCC CCAACGAACA CGCCGTCCAC
AGCCTCGAAC ACGGCGCCAT CTGGATCACC TACGACCCCG GCCTGCCACA ATCCCAGATC
GAACAACTCA CCAAAAAGGT CAACGGCCGC GACTACACCC TCATGAGCCC CTACAAGGGC
CAGGACTCCC CCATCTCCCT GCAAGCCTGG GGTTACCAGC TCAAGCTCTC CAAAGCCGAC
GACGACCGCA TCGACGAGTT CATCGCCACC TACCGCGTCG AAGCCTCCCA GGAACCCGGC
GCCACCTGCT CCGGCGGTGT CACCGCCACC GGCGACAAAC CCGTCGACCA ACCCGACGAG
CACTGA
 
Protein sequence
MAKTSSRKNH KGKGKPKRKP TAAKRGIPWW TVSVVALVLV AVGVFGYGIW SQPSAPEDAD 
IDGLVNYKAQ KAKWFDDRDH KSGPLKYATT PPAGGNHNAT WQTCTGIVYD KPIPNEHAVH
SLEHGAIWIT YDPGLPQSQI EQLTKKVNGR DYTLMSPYKG QDSPISLQAW GYQLKLSKAD
DDRIDEFIAT YRVEASQEPG ATCSGGVTAT GDKPVDQPDE H