Gene Snas_4714 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4714 
Symbol 
ID8885920 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5017075 
End bp5017824 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content69% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003513450 
Protein GI291302172 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.915806 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACTGA CGATCACGAC CCTTGCCGAG CGCCCGGAGT TGACCGGCGC GTTTTGGGAG 
CTGCGGGACA ACTGGCCCCG GTACATCACC GAGGACCGGG TCAGCTGGTT CCACTATGGG
GCGATCCTGA CGACGTTTCC CGAGTACGTG CTGGTGGCCA CCGACGCCGA CGGGCAGCTG
GTGGCGCGCG CGTTGAGTGT GCCGTTCAAG CTGGACCTGG AGGGGCGGCG CGAGCTGCCG
TCCGGGGGCT GGGACCAGGC ACTGTTGTGG GCGTTCTCCG ACCACCGCGC GAGCCGGGAA
CCGGATGTGG TGAGCGCGAT CGAGATCTCC GTGGACAACC GTCACCTGGG TCGCGGCCTG
TCGCGGGAGG TGCTGGCGAG TATGCGCGAC AACGCGCGTG CGCGCGGTTT CGCCGAGTTG
GTGGCGCCGT TGCGGCCGAC CGGCAAGCAC CTGGAGCCGG ACGCGCCGAT GAGTGAGTAC
GCGTGGCGCA CCCGCGAGGA CGGGCTCCCG CACGATCCGT GGATCCGCAC CCACGTGCGC
GCGGGAGCCG TCATCGACTC GGTGGCCTCG ACGTCCATGG TGGTCACCGG ATCGCTGGCC
GACTGGCGGA CCTGGACGGG GTTGCCGTTC GACACGAGCG GTCCCGTCGT GGTGCCGTCG
GGGTTGAATC CGGCGCAGTG CTATGTGGAG GCCGATTACG CGGTCTACGT CGAGCCGAAC
GTGTGGGTGC GTCACGCGTT GACCGGCTGA
 
Protein sequence
MSLTITTLAE RPELTGAFWE LRDNWPRYIT EDRVSWFHYG AILTTFPEYV LVATDADGQL 
VARALSVPFK LDLEGRRELP SGGWDQALLW AFSDHRASRE PDVVSAIEIS VDNRHLGRGL
SREVLASMRD NARARGFAEL VAPLRPTGKH LEPDAPMSEY AWRTREDGLP HDPWIRTHVR
AGAVIDSVAS TSMVVTGSLA DWRTWTGLPF DTSGPVVVPS GLNPAQCYVE ADYAVYVEPN
VWVRHALTG