Gene Snas_4696 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4696 
Symbol 
ID8885902 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5005633 
End bp5007021 
Gene Length1389 bp 
Protein Length462 aa 
Translation table11 
GC content66% 
IMG OID 
ProductGeneral substrate transporter 
Protein accessionYP_003513432 
Protein GI291302154 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGACG CCAAAGCCGA GGTGCCCGCG GGTTCGTCAC CGCTGTCGGC CCCCACCAGC 
ACCCGTCGCG CCATCCTCAA CACGCTGCGC GGCTCCTCCG GAAACCTGGT CGAGTGGTAC
GACGTCTACA TCTACACCGT CTTCGCTTCT TATTTCGAAG CCCAGTTCTT CGCCGAGTCG
GACGAGAACT CCACCATCTA CATCTACGCG ATCTTCGCGG TGACGTTCCT CATGCGCCCC
GTCGGCTCCT GGTTCTTCGG ACGCTTCGCC GACCGGCACG GCCGCCGCGC CGCCCTGCTG
TTCAGCGTGT CCCTGATGGC GGGCTGTTCC TTCCTCATCG CGATCATGCC CACCCGGTTC
TCGATCGGGG TCTGGGCGGC GGTCATCCTG ATCCTGGCCC GGCTGGTGCA GGGCTTCGCC
ACCGGCGGTG AGTACGGCAC CTCGGCGACC TACATGTCCG AGGCCGCCAC CCGCGAACGG
CGCGGCTTCT TCTCCTCGTT CCAGTACGTC ACCCTCGTCG GCGGCCACGT GCTGGCGCAG
CTGACGCTGC TGATCATGTT CGTGTTCCTC GACGACACCG AGATCAAGTC CTGGGCCTGG
CGGATCCCGT TCGCCATCGG AGGTCTGGCG GCGCTGGTGG TGCTGTGGCT GCGGCGATCC
ATGGACGAGT CGCTGTCGGC CGAGCACCTG GCCGCCACCC GCTCGGGCCG CGACCGCCGC
TCGGGTTCGC TGCGGGAACT GTTCGGCTCG TACTTCAAGC CGCTGCTTCT GGTCTTCCTG
ATCACGCTGG GCGGCACCGT CGCCTTCTAC ACCTACAGCG TCAACGCCCC GGCGATCATC
AAGGCCACCT ACACCGACCA GGCGATCGTG GCCACCTGGG TCAACCTGAT CGGCCTGATC
TTCCTGATGT GCCTGCAACC GGTCGGCGGC TGGATCTCCG ACAAGGTCGG CCGCAAACCG
CTGCTGGTGT TCTTCGGCGT CGGCGGCGTC ATCTACACCT ACGTCCTGAT CACCTACCTG
CCCAAGACCA CCAACCCGGT CGCGTCCTTC GCGCTGGTCG CGGTCGGCTA CATCATCCTC
ACCGGCTACA CCTCCATCAA CGCGCTGGTC AAGGCCGAAC AGTTCCCGGC CTCGATCCGG
GCGCTGGGGG TCGGCCTGGG CTACGCGCTG GCCAACTCCG CCTTCGGCGG CACCGCGCCG
GTGATCTACG AGACGATGAA GACCAACAAC CACGTGCCGC AGTTCATCGC GTACGTGACG
ATCTGCATCG CGGTCTCGCT GGTGGTCTAC ATCTTCTGGC TGAAGAACAA GTCCACGACG
GCCCTGGACA TCGAGTCCGG GCACGCCTTC GAACCCGTCG GCGCCGGTGC CGCCTCACGA
AAGCCGTGA
 
Protein sequence
MSDAKAEVPA GSSPLSAPTS TRRAILNTLR GSSGNLVEWY DVYIYTVFAS YFEAQFFAES 
DENSTIYIYA IFAVTFLMRP VGSWFFGRFA DRHGRRAALL FSVSLMAGCS FLIAIMPTRF
SIGVWAAVIL ILARLVQGFA TGGEYGTSAT YMSEAATRER RGFFSSFQYV TLVGGHVLAQ
LTLLIMFVFL DDTEIKSWAW RIPFAIGGLA ALVVLWLRRS MDESLSAEHL AATRSGRDRR
SGSLRELFGS YFKPLLLVFL ITLGGTVAFY TYSVNAPAII KATYTDQAIV ATWVNLIGLI
FLMCLQPVGG WISDKVGRKP LLVFFGVGGV IYTYVLITYL PKTTNPVASF ALVAVGYIIL
TGYTSINALV KAEQFPASIR ALGVGLGYAL ANSAFGGTAP VIYETMKTNN HVPQFIAYVT
ICIAVSLVVY IFWLKNKSTT ALDIESGHAF EPVGAGAASR KP