Gene Snas_4663 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4663 
Symbol 
ID8885868 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4971948 
End bp4973132 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content74% 
IMG OID 
Producturoporphyrin-III C-methyltransferase 
Protein accessionYP_003513399 
Protein GI291302121 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.607311 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00373911 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGTATCCAC TTGGCCTGCG CCTCGACCGA CGGCGGGTAC TCGTCGTCGG CGCCGGAAAT 
CTCGCGCACC GGCGTGTACC CCGACTCCTC GACGCCGGAG CCGACGTGCT GCTCGTGTCG
CCGCACGCCC GCGATTCGCT GCGGGCCATG GCATCGGAGC ACCGACTGCG CTGGGAGGAG
CGACGGTTCC AGGCCAGCGA CCTGGACGGG GCCTGGCTGG TGCTGGCCGC CACCGACGAC
CCGGCGGTCA ACGCCGAGAT CTCGGCGCTG GCCGAGGAAG CGCGGGTCTT CTGCGTCCGC
GCCGACGACC GGGAGGCCGC CACGGCGTGG ACCCCAGCGG TCGGGCAGCA CGAGGAGCTG
ACCTTCGCGG CCTTCGCGGG CGGGGACCCG CGTCGGGCGG CGGCGCTGCG GGACCGGCTG
CTGGAACTGG CCGCGACCGG CGAGGTCAGC CCGCCCCGGT TCCGGGGCAG CGGAACGATT
CCCGGGGTGG CGCTGGTGGG GGCCGGTCCC GGCGACCCCG ACCTGATCAC GGTCGCCGGA
CGGGCGGCGC TGGCGCAGGC CGACGTCGTC ATCGCCGACC GGCTGGCTCC GGCGCGGCTG
CTGGAGGAAC TGCGTGACGA GACCGAGCTC ATCGACGCGG CCAAGATTCC CTATGGGCGG
CAACGGGAAC AGGACGAGAT CATCGCGCTG ATGCTCGAAC GCGCCAAGAA CGGCAAGTTC
GTGGTGCGGC TCAAGGGCGG CGACGGCTTC GTGTTCGGAC GCGGCGGCGA GGAGCTGGAC
GCCTGCGCGG CGGCGGGCAT CCCGGTGCGG GTGATCCCGG GCGTCACCAG CGCGATCGCC
GGACCCGCGC TGGCGTCGAT CCCGGTGACC GAACGCGGCC TGGTGCACGA GTTCACCATC
GTGAGTGGAC ACGTGGCGCC GGGCGACCCG ACGAGCCTCA CCAACTGGGA CGCGCTGGCC
CGGCTACGCG GCACCGTCGT GGTGCTGATG GGGGTGCGGC ATCGCGGAGC GATCGCGGCA
GCCCTCATCG CGGGTGGCCG CGACGCGGGC ACCCCGGCGG CGGTGGTGAT GGACGCATCG
ACGCCCCGGC AACGCGAGGT GCGCACGACG CTGGCGGAGC TGGGCGACGT GGAGGTCACC
TCACCGGCGG TCCTGGTGAT CGGCGAGGTG ACCCGGCAGC GCTAG
 
Protein sequence
MYPLGLRLDR RRVLVVGAGN LAHRRVPRLL DAGADVLLVS PHARDSLRAM ASEHRLRWEE 
RRFQASDLDG AWLVLAATDD PAVNAEISAL AEEARVFCVR ADDREAATAW TPAVGQHEEL
TFAAFAGGDP RRAAALRDRL LELAATGEVS PPRFRGSGTI PGVALVGAGP GDPDLITVAG
RAALAQADVV IADRLAPARL LEELRDETEL IDAAKIPYGR QREQDEIIAL MLERAKNGKF
VVRLKGGDGF VFGRGGEELD ACAAAGIPVR VIPGVTSAIA GPALASIPVT ERGLVHEFTI
VSGHVAPGDP TSLTNWDALA RLRGTVVVLM GVRHRGAIAA ALIAGGRDAG TPAAVVMDAS
TPRQREVRTT LAELGDVEVT SPAVLVIGEV TRQR