Gene Snas_4644 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4644 
Symbol 
ID8885849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4950509 
End bp4951711 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content66% 
IMG OID 
Productextracellular solute-binding protein family 1 
Protein accessionYP_003513380 
Protein GI291302102 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0101413 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACAATCA ATCTCTACAA CGCCCCGCAA CAGAACCTGC AACAAATTGT CGACAGGTGT 
AATAAGGAGG CGGACGGGGC TTACGACATC AAGCTCCACA CGCTGCCCCG CGGCGCCGAC
GGTCAGCGCG AACAGATGGT TCGCCGACTG GCGGCCGAGG ACTCCGGAAT GGACGTTCTC
GGTCTCGACG TCACCTGGAC CGCCGAGCTC GCCTCGGCGA AGTGGATCCG GCCGTGGCCC
AAGGACAAGG CCGCCGAAGC CACCGAGGGC GTCCTGGAAG GGCCGCTGCA GACGGCCATG
TACGAGGACG AGCTCTACGC CGCCCCGTAC AACTCCAACG TCCAGTTGCT GTGGTACCGC
TCGGATCTGG TGCCCGAGGC CCCGACAACG TGGTCGGAGC TGATCGACGT GGCCGAGAAG
CTGAAGTCCG AGGACAAGCC GCACTACTTC GAGGTCACCG GCGCCCAGTA CGAGGGTCTC
GTCGTGTGGT TCAACTCCAT GGTGGAGTCC GCCGGCGGCA AGCTCCTCAA CGAGGACGGC
GACAAGGTCG AGCTGGGTCC CGAGGCCGTC AAGGCCCTGG AGACCATGCG CGACTTCGCC
AAGTCCGCCG CGGCCAACCC CTCGCTGCCC AACACCCAGG AGGACCCCGC CCGGCTCGCG
GTCGAGAGCG GCGCCTCGTT CGGCGAGGCC AACTGGCCGT TCGTGTACCC CGCCATGCAG
GGCAGCGGAG CAAAGTTCGC CAAGGACTTC AAGTGGGCCC CGTACCCCGG CATCGACGGG
CCCGGAAAGT CTCCGCTCGG CGGCGCCAAC TTCGCCGTCA GCAGTTACTC CGAGCACCCC
GACGAGGCCT TCGACGCGAC ACTGTGCCTG CGGGACCCGC AAAGTCAGCT GACGGCTGCC
GTCAAGGACG GTCTGCCGCC CACCATCGAG AGCGTCTACG ACTCCACCGA CACGGTGGAG
GTGACCGACC CGGAGGGCAA GACCTCGCAG GTCGGCATGG CCGACGCGTA CCCGATGCGT
GACGCCATCA AGGACGCCAT CAAGAACGCG GCCGTCCGTC CGGTAACCCC GGTCTACCAG
AATGTGTCCA CAGTGACTTC AAAGATCCTG TCACCCCCGG GGTCCATCGA CCCCGAGACG
ACCGAACAGC GGCTTAGGGA ACAGATCGCC GACGCCCTGG AATCCAAGGG GGTGCTGCCG
TGA
 
Protein sequence
MTINLYNAPQ QNLQQIVDRC NKEADGAYDI KLHTLPRGAD GQREQMVRRL AAEDSGMDVL 
GLDVTWTAEL ASAKWIRPWP KDKAAEATEG VLEGPLQTAM YEDELYAAPY NSNVQLLWYR
SDLVPEAPTT WSELIDVAEK LKSEDKPHYF EVTGAQYEGL VVWFNSMVES AGGKLLNEDG
DKVELGPEAV KALETMRDFA KSAAANPSLP NTQEDPARLA VESGASFGEA NWPFVYPAMQ
GSGAKFAKDF KWAPYPGIDG PGKSPLGGAN FAVSSYSEHP DEAFDATLCL RDPQSQLTAA
VKDGLPPTIE SVYDSTDTVE VTDPEGKTSQ VGMADAYPMR DAIKDAIKNA AVRPVTPVYQ
NVSTVTSKIL SPPGSIDPET TEQRLREQIA DALESKGVLP