Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_4637 |
Symbol | |
ID | 8885842 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 4940760 |
End bp | 4942226 |
Gene Length | 1467 bp |
Protein Length | 488 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | Peptidase M1 membrane alanine aminopeptidase |
Protein accession | YP_003513373 |
Protein GI | 291302095 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.185093 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00804197 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAATCCAC GATTGGGTGT AATCGCGGTT GCCGGTGTTA CCACGGCCGT GCTCGTGGCC GGATGCGGAC AGACCGGCAA GCTGGAGAGC GAGTCCTCCG ACGGCCCCCC GGAGGCCGCG AAGGAGGACC TGGAGGCCGG CAAGAGCGAA CCGGTGACCG ACCCCATGTA CCCGGACTAC GGACACGAAA ACATCGACGT CCTCCACTAC GGCATGGAGC TGGACTACTC CCCCGAGAAG AAGACGCTGT CGGGCCTGGT GCGGTTGACG ATCCGCCCGG TCGAGGACGC TTCCGAACTG GCGCTTGACT TCTCCGACGC CATGGAGATC AGCAACCTCA CCGTCGACGG CAAGAAGACC GACTTCGACC TGAACGAGTG GGACCTGACC GTCGACACCG GACTCAAGAA GGACCGCAAC GTCGAGGTCG AGGTGACCTA CAAGGGCACC CCCGAGCTCG TGGACGCCCC GGCCGAGCGC GGCGACATGG CCGAGGGCCT GGGGGCCTCG GTCGGCCAGA ACGGCGAACT GTGGGCGTTC CAGGAACCGC ACGGCGCCCT GACCTGGTAT CCCGTCAACG ACCACCCCTC CGACGAGGCC ATGTACGACT TCGAGGTCAC CGTGCCCGAG GGCTACGCGG GTGTCGCCAG CGGCACCTTC GAGGGCAAGA AGGGCAACAC CTACAGCTGG TCCTCTTCGG ACCCGGTCGC CAGCTACCTG ACCACGATCG CCGTCGACAA GTACGAGATG GTCGAGATGG AGGGCCCCGG CGATCTGCCG GTGACGGCGT GGATCCCGCC GCAGTACGCC GAGTGGGAGG CGTCGCTGAA GAAGATGCCC GAGATGATCG AGTACCTGGA GAAGCTGTAC GGCCCCTACC CGTTCGACTC GGCGGGCCTG GTGCTGGTCG GCGGTGAGTC CGGTATGGAG ACCCAGCAGA TGATCACGCT GTCGGGCGCC GTCGGCATGG GCGGCCCCGA GGCCAGCGAG TCGGTGGTGG TGCACGAACT GGCGCACCAG TGGTTCGGCG ACACCGTCAC CCCGCTGGAC TGGACCGGCC TGTGGATCAA CGAGGGCCCG GCCACCTACG CGGAGCAGAT GTGGCTGGTC GACCAGGGCA TGCAGACCGC CAAGGACGTC GAGAAGGCCT TCGAGGCCCA GGACCAGGAC CTGCGTACCC AGCACGGCCC GCCCGGCGAC CCCGACCCCA ACGCCTTCGC CAGCAGCAAC AGTTACGTGT GCCCGGCGCT GATGCTCATC AAACTGGGCG ACCAGATCGG CGGCCGCGAC AAGGTCGACG AGCTCCTGGG GGCCTGGGTG GCCGCCCACG AGAACAAGTC GGTCACCCGC GAGGACTTCG TCGGCTTCGC CAACGAGCAC ACCGGCAAGG ACCTGACAAA GTTCTTCGAC AGCTGGCTGG ACTCGGCCAA GACGCCCAAG GACAAGAAGG ACAAGAAGAA GAAATAG
|
Protein sequence | MNPRLGVIAV AGVTTAVLVA GCGQTGKLES ESSDGPPEAA KEDLEAGKSE PVTDPMYPDY GHENIDVLHY GMELDYSPEK KTLSGLVRLT IRPVEDASEL ALDFSDAMEI SNLTVDGKKT DFDLNEWDLT VDTGLKKDRN VEVEVTYKGT PELVDAPAER GDMAEGLGAS VGQNGELWAF QEPHGALTWY PVNDHPSDEA MYDFEVTVPE GYAGVASGTF EGKKGNTYSW SSSDPVASYL TTIAVDKYEM VEMEGPGDLP VTAWIPPQYA EWEASLKKMP EMIEYLEKLY GPYPFDSAGL VLVGGESGME TQQMITLSGA VGMGGPEASE SVVVHELAHQ WFGDTVTPLD WTGLWINEGP ATYAEQMWLV DQGMQTAKDV EKAFEAQDQD LRTQHGPPGD PDPNAFASSN SYVCPALMLI KLGDQIGGRD KVDELLGAWV AAHENKSVTR EDFVGFANEH TGKDLTKFFD SWLDSAKTPK DKKDKKKK
|
| |