Gene Snas_4612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4612 
Symbol 
ID8885817 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4920479 
End bp4921285 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content70% 
IMG OID 
ProductEndonuclease/exonuclease/phosphatase 
Protein accessionYP_003513348 
Protein GI291302070 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0765415 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0123856 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAATCC GATATCTCGT CGCGACGCCG ATCCTGTCGC TGGCCGCGAT CGTCGCGCTC 
ACCGGCCCGG TCGTGGCCAC ACCGCAGGAG GCGAAGAGCG TCGTTCGCGT CCTGAACTAC
AACATCCAGG CCGGACGTGG CGCCGGTGAG GATCCCAATG TGGACCCGCC GAACATTCCC
CGCACCGCCG CTGCGATCCG CGAACACGAT CCCGACATCG TGACCCTGCA GGAGGTGCAC
CAGCCCGACA CCTCCGGGGC CGACCAGGTG GCGCAGCTGG CCGCCGAGCT CGACATGAAC
GCCTACTTCG GGCCCGCCGA CGGCAACGGT TCGGGTGGCC AGGCCGGGAA CGCGATCCTG
ACGAAACTGC CCATCGTCGA GCGCGTCAAC CGGCGACTGC CCGACGATCC CGACACCAAC
AACGTCAAAC GGGCGCTGGC CGGGGCCAAA CTCGACCTGG GCGGCGGCGC GTTCATCCGG
GTGTTCACCA CGCACCTGTC GCCGGGGCTG AGCGACGCCG TCGTGGCCGA GCGGGAAGCC
CAGGGGCGGT GGGCACTCGA CTATCTCAGC CACAGTGGAC CGCTGCTGTT CACCGGCGAC
TTCAACGAGC GTCCGGAGAA CCGCATCCAC GCGTGGGCGC TGGCGGACGG CTTCGCCGAC
ACCGGCGGCG AGGTGGCGCC GGACCCGACC CACGGCGACG CCCGCATCGA CTTCGTCTAC
GCGCGCGGCG TCACCGCGAC GGCCGGGCTG GTGCCCGACA CCGACGCCTC CGACCACCGG
CCCGTGGTCA TCGACCTGGA GGTCTGA
 
Protein sequence
MRIRYLVATP ILSLAAIVAL TGPVVATPQE AKSVVRVLNY NIQAGRGAGE DPNVDPPNIP 
RTAAAIREHD PDIVTLQEVH QPDTSGADQV AQLAAELDMN AYFGPADGNG SGGQAGNAIL
TKLPIVERVN RRLPDDPDTN NVKRALAGAK LDLGGGAFIR VFTTHLSPGL SDAVVAEREA
QGRWALDYLS HSGPLLFTGD FNERPENRIH AWALADGFAD TGGEVAPDPT HGDARIDFVY
ARGVTATAGL VPDTDASDHR PVVIDLEV